FFCP PHASE1:Hg19::chr11:31832539..31832548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=P26367 | |UniProt=P26367 | ||
|association_with_transcript=44bp_to_ENST00000379111,uc001mte.3_5end | |association_with_transcript=44bp_to_ENST00000379111,uc001mte.3_5end | ||
|cluster_id=chr11:31832539..31832548,- | |||
|description=CAGE_peak_16_at_PAX6_5end | |description=CAGE_peak_16_at_PAX6_5end | ||
|id=chr11:31832539..31832548,- | |id=chr11:31832539..31832548,- | ||
|ontology_enrichment_celltype=CL:0000064!1.13e-09!3;CL:0005012!1.13e-09!3;CL:0000067!1.13e-09!3;CL:0002304!1.13e-09!3;CL:0000075!9.41e-07!27 | |ontology_enrichment_celltype=CL:0000064!1.13e-09!3;CL:0005012!1.13e-09!3;CL:0000067!1.13e-09!3;CL:0002304!1.13e-09!3;CL:0000075!9.41e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000064;7.72e-46;3!CL:0000067;7.72e-46;3!CL:0005012;7.72e-46;3!CL:0002304;7.72e-46;3!CL:0000075;2.69e-09;27!CL:0000047;4.18e-09;2!CL:0002535;4.18e-09;2!CL:0000710;1.98e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.67e-45,3;CL:0000067,1.67e-45,3;CL:0005012,1.67e-45,3;CL:0002304,1.67e-45,3;CL:0000075,2.87e-09,27;CL:0002535,4.34e-09,2;CL:0000710,2.21e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001778;7.72e-46;3!UBERON:0001775;7.72e-46;3!UBERON:0000488;1.35e-34;4!UBERON:0002203;2.48e-23;6!UBERON:0001768;2.48e-23;6!UBERON:0002200;2.48e-23;6!UBERON:0007625;2.47e-22;11!UBERON:0001801;1.23e-17;14!UBERON:0002331;2.79e-14;10!UBERON:0000019;4.34e-13;19!UBERON:0000047;4.34e-13;19!UBERON:0004088;4.34e-13;19!UBERON:0010230;4.34e-13;19!UBERON:0006876;4.85e-13;11!UBERON:0000970;1.89e-12;20!UBERON:0002104;7.15e-12;21!UBERON:0001456;7.15e-12;21!UBERON:0000020;7.25e-11;23!UBERON:0001032;2.00e-10;24!UBERON:0004456;2.00e-10;24!UBERON:0000178;1.01e-09;15!UBERON:0000179;1.01e-09;15!UBERON:0000463;1.01e-09;15!UBERON:0006955;4.18e-09;2!UBERON:0004801;4.18e-09;2!UBERON:0010371;4.59e-08;31!UBERON:0000922;6.54e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.67e-45,3;UBERON:0001775,1.67e-45,3;UBERON:0000488,2.40e-34,4;UBERON:0002203,3.64e-23,6;UBERON:0001768,3.64e-23,6;UBERON:0002200,3.64e-23,6;UBERON:0007625,2.92e-22,11;UBERON:0001801,1.40e-17,14;UBERON:0002331,1.94e-14,10;UBERON:0000358,1.94e-14,10;UBERON:0000307,1.94e-14,10;UBERON:0000091,1.94e-14,10;UBERON:0000087,1.94e-14,10;UBERON:0007010,1.94e-14,10;UBERON:0007806,1.94e-14,10;UBERON:0008780,1.94e-14,10;UBERON:0005728,1.94e-14,10;UBERON:0006876,5.96e-13,11;UBERON:0000019,2.07e-12,20;UBERON:0000047,2.07e-12,20;UBERON:0010312,2.07e-12,20;UBERON:0004088,2.07e-12,20;UBERON:0010230,2.07e-12,20;UBERON:0003072,2.07e-12,20;UBERON:0004128,2.07e-12,20;UBERON:0003071,2.07e-12,20;UBERON:0000970,7.79e-12,21;UBERON:0002104,7.79e-12,21;UBERON:0001456,2.60e-11,22;UBERON:0000020,2.16e-10,24;UBERON:0001032,2.16e-10,24;UBERON:0004456,2.16e-10,24;UBERON:0000178,7.90e-10,15;UBERON:0000179,7.90e-10,15;UBERON:0000463,7.90e-10,15;UBERON:0006955,4.34e-09,2;UBERON:0004801,4.34e-09,2;UBERON:0005085,4.18e-08,31 | |||
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| ||
|short_description=p16@PAX6 | |short_description=p16@PAX6 | ||
}} | }} |
Latest revision as of 14:55, 17 September 2015
Short description: | p16@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PAX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000379111, uc001mte.3_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | P26367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.67e-45 | 3 |
ciliated epithelial cell | 1.67e-45 | 3 |
multi-ciliated epithelial cell | 1.67e-45 | 3 |
non-pigmented ciliary epithelial cell | 1.67e-45 | 3 |
columnar/cuboidal epithelial cell | 2.87e-09 | 27 |
epithelial cell of cervix | 4.34e-09 | 2 |
neurecto-epithelial cell | 2.21e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.67e-45 | 3 |
ciliary body | 1.67e-45 | 3 |
atypical epithelium | 2.40e-34 | 4 |
vasculature of eye | 3.64e-23 | 6 |
uvea | 3.64e-23 | 6 |
vasculature of head | 3.64e-23 | 6 |
pigment epithelium of eye | 2.92e-22 | 11 |
anterior segment of eyeball | 1.40e-17 | 14 |
umbilical cord | 1.94e-14 | 10 |
blastocyst | 1.94e-14 | 10 |
blastula | 1.94e-14 | 10 |
bilaminar disc | 1.94e-14 | 10 |
inner cell mass | 1.94e-14 | 10 |
cleaving embryo | 1.94e-14 | 10 |
connecting stalk | 1.94e-14 | 10 |
inner cell mass derived epiblast | 1.94e-14 | 10 |
extraembryonic mesoderm | 1.94e-14 | 10 |
vasculature of organ | 5.96e-13 | 11 |
camera-type eye | 2.07e-12 | 20 |
simple eye | 2.07e-12 | 20 |
immature eye | 2.07e-12 | 20 |
ocular region | 2.07e-12 | 20 |
eyeball of camera-type eye | 2.07e-12 | 20 |
optic cup | 2.07e-12 | 20 |
optic vesicle | 2.07e-12 | 20 |
eye primordium | 2.07e-12 | 20 |
eye | 7.79e-12 | 21 |
visual system | 7.79e-12 | 21 |
face | 2.60e-11 | 22 |
sense organ | 2.16e-10 | 24 |
sensory system | 2.16e-10 | 24 |
entire sense organ system | 2.16e-10 | 24 |
blood | 7.90e-10 | 15 |
haemolymphatic fluid | 7.90e-10 | 15 |
organism substance | 7.90e-10 | 15 |
uterine epithelium | 4.34e-09 | 2 |
cervix epithelium | 4.34e-09 | 2 |
ectodermal placode | 4.18e-08 | 31 |