FFCP PHASE1:Hg19::chr6:30029194..30029205,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:30029194..30029205,+ to FFCP PHASE1:Hg19::chr6:30029194..30029205,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30834 | |EntrezGene=30834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13182 | |HGNC=13182 | ||
|TSSclassifier=strong | |||
|UniProt=Q2L6J2,Q9P1U0 | |UniProt=Q2L6J2,Q9P1U0 | ||
|association_with_transcript=158bp_to_NM_170783,uc003npa.2_5end | |||
|cluster_id=chr6:30029194..30029205,+ | |||
|description=CAGE_peak_6_at_ZNRD1_5end | |||
|id=chr6:30029194..30029205,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.18e-07!254;CL:0002321!4.75e-07!248;CL:0000220!6.66e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.91e-15;2!CL:0000650;1.91e-15;2!CL:1000500;1.91e-15;2!CL:1000618;1.91e-15;2!CL:1001318;1.91e-15;2!CL:0002173;1.91e-15;2!CL:1000507;2.66e-12;10!CL:1000494;2.66e-12;10!CL:0000346;9.43e-11;3!CL:1000428;9.43e-11;3!CL:1000449;1.59e-08;15!CL:0000669;2.18e-08;4!CL:1000497;1.25e-07;17!CL:0002518;1.25e-07;17!CL:0002559;5.86e-07;5!CL:0002595;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,2.74e-15,2;CL:1000500,2.74e-15,2;CL:1000618,2.74e-15,2;CL:1001318,2.74e-15,2;CL:0002173,2.74e-15,2;CL:1000507,2.98e-12,10;CL:1000494,2.98e-12,10;CL:0000346,8.17e-11,3;CL:1000428,8.17e-11,3;CL:1000449,1.71e-08,15;CL:0000669,2.61e-08,4;CL:1000497,1.33e-07,17;CL:0002518,1.33e-07,17;CL:0002559,5.38e-07,5;CL:0002595,6.39e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!7.67e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.88e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;1.91e-15;2!UBERON:0003838;1.91e-15;2!UBERON:0003586;1.91e-15;2!UBERON:0005169;1.91e-15;2!UBERON:0002321;1.91e-15;2!UBERON:0005215;1.91e-15;2!UBERON:0002303;1.91e-15;2!UBERON:0002319;1.91e-15;2!UBERON:0004211;2.66e-12;10!UBERON:0009773;2.66e-12;10!UBERON:0001231;2.66e-12;10!UBERON:0004810;2.66e-12;10!UBERON:0002113;2.27e-11;24!UBERON:0011143;2.27e-11;24!UBERON:0000412;9.43e-11;3!UBERON:0001992;9.43e-11;3!UBERON:0000489;1.57e-09;29!UBERON:0006554;3.09e-09;30!UBERON:0001008;3.09e-09;30!UBERON:0006555;1.59e-08;15!UBERON:0004819;1.59e-08;15!UBERON:0001285;1.59e-08;15!UBERON:0007684;1.59e-08;15!UBERON:0002346;2.18e-08;4!UBERON:0000923;2.18e-08;4!UBERON:0010316;2.18e-08;4!UBERON:0003891;2.18e-08;4!UBERON:0005291;2.18e-08;4!UBERON:0002073;5.86e-07;5!UBERON:0002050;5.86e-07;5!UBERON:0005423;5.86e-07;5!UBERON:0003834;5.86e-07;5!UBERON:0001533;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,2.74e-15,2;UBERON:0003838,2.74e-15,2;UBERON:0003586,2.74e-15,2;UBERON:0005169,2.74e-15,2;UBERON:0002321,2.74e-15,2;UBERON:0005215,2.74e-15,2;UBERON:0002303,2.74e-15,2;UBERON:0002319,2.74e-15,2;UBERON:0004810,2.98e-12,10;UBERON:0000412,8.17e-11,3;UBERON:0001992,8.17e-11,3;UBERON:0002113,1.60e-10,26;UBERON:0003918,1.60e-10,26;UBERON:0011143,1.60e-10,26;UBERON:0005095,1.60e-10,26;UBERON:0007687,1.60e-10,26;UBERON:0000489,6.17e-09,31;UBERON:0004211,1.71e-08,15;UBERON:0009773,1.71e-08,15;UBERON:0001231,1.71e-08,15;UBERON:0001285,1.71e-08,15;UBERON:0007684,1.71e-08,15;UBERON:0004208,1.71e-08,15;UBERON:0003891,2.61e-08,4;UBERON:0006555,5.09e-08,16;UBERON:0004819,5.09e-08,16;UBERON:0002073,5.38e-07,5;UBERON:0005086,5.38e-07,5;UBERON:0003834,6.39e-07,5;UBERON:0001533,6.39e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0,0.164201178899891,0,0,0,0,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0.267899184852239,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.309157587715317,0,0.37223371266318,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.243947412259191,0,0.116193942869518,0.414644220061482,0.252320850875628,0.36497735907583,1.56449532329816,0.643240938192885,0,0,0,0.591534000199219,0.505754070234305,0.241011029883482,0.330881918197182,0.653638332277218,0.237270619111097,0.808987848960987,0,0.769494313892781,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0.535286966391485,0.157702415033935,0,0,0,0,0,0.553107505625109,0.173767228936166,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0.241718899183244,0.40101294060657,0.0920809889358963,0,0,0.131124414959424,0,0,0,1.46139224653261,0,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0,0.366277859273374,0,0,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0,0,0,0.0852266274161009,0,0,0.384380134730212,0,0,0,0.31481234683064,0,0,0,0,0.37064843820784,0.858749320451947,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0.606547444719948,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,1.10273068709225,0.66343897524122,0,0.578775534266688,0,0.405820753925408,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0.20453736500431,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0,0,0,0.179515288819544,0,0.638002319463839,0.366390373607449,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,4.0587323241913,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0.0967563312890851,0.292357268344742,0.246346371159628,0,0.0882561266915003,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.472699093843342,0.494495150286999,0.337017719270924,0.196854963029498,0,0,0,0.160753148465019,0.137539436597234,0,0.2249738915515,0,0,0,0.394028536495991,0.0524545881349981,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0.233713309847224,0,0.378806010550178,0,0,0,0,0,0,0.318593534327405,0.449803112163605,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0.680117776536817,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0.215649622793364,0.943595651135378,0.327628914576042,0,0.212574920101683,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0.252071696221718,0,0,0,0,0,0.366857197043358,0,0,0,0,0,0,0.781514011233092,0,0.49131575253029,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,1.58284119923659,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0.840816489941367,0,0.431855182437243,0.9555033757741,0,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565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| 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| ||
|short_description=p6@ZNRD1 | |||
}} | }} |
Latest revision as of 15:26, 17 September 2015
Short description: | p6@ZNRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ZNRD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 158bp_to_NM_170783, uc003npa.2_5end |
EntrezGene: | ZNRD1 |
HGNC: | 13182 |
UniProt: | Q2L6J2Q9P1U0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 2.74e-15 | 2 |
kidney interstitial cell | 2.74e-15 | 2 |
juxtaglomerular complex cell | 2.74e-15 | 2 |
renal interstitial pericyte | 2.74e-15 | 2 |
extraglomerular mesangial cell | 2.74e-15 | 2 |
kidney tubule cell | 2.98e-12 | 10 |
nephron tubule epithelial cell | 2.98e-12 | 10 |
hair follicle dermal papilla cell | 8.17e-11 | 3 |
stem cell of epidermis | 8.17e-11 | 3 |
epithelial cell of nephron | 1.71e-08 | 15 |
pericyte cell | 2.61e-08 | 4 |
kidney cell | 1.33e-07 | 17 |
kidney epithelial cell | 1.33e-07 | 17 |
hair follicle cell | 5.38e-07 | 5 |
smooth muscle cell of the subclavian artery | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 2.74e-15 | 2 |
abdominal segment connective tissue | 2.74e-15 | 2 |
trunk connective tissue | 2.74e-15 | 2 |
interstitial tissue | 2.74e-15 | 2 |
extraglomerular mesangium | 2.74e-15 | 2 |
kidney interstitium | 2.74e-15 | 2 |
juxtaglomerular apparatus | 2.74e-15 | 2 |
mesangium | 2.74e-15 | 2 |
nephron tubule epithelium | 2.98e-12 | 10 |
dermal papilla | 8.17e-11 | 3 |
papillary layer of dermis | 8.17e-11 | 3 |
kidney | 1.60e-10 | 26 |
kidney mesenchyme | 1.60e-10 | 26 |
upper urinary tract | 1.60e-10 | 26 |
kidney rudiment | 1.60e-10 | 26 |
kidney field | 1.60e-10 | 26 |
cavitated compound organ | 6.17e-09 | 31 |
nephron epithelium | 1.71e-08 | 15 |
renal tubule | 1.71e-08 | 15 |
nephron tubule | 1.71e-08 | 15 |
nephron | 1.71e-08 | 15 |
uriniferous tubule | 1.71e-08 | 15 |
nephrogenic mesenchyme | 1.71e-08 | 15 |
stroma | 2.61e-08 | 4 |
excretory tube | 5.09e-08 | 16 |
kidney epithelium | 5.09e-08 | 16 |
hair follicle | 5.38e-07 | 5 |
hair follicle placode | 5.38e-07 | 5 |
thoracic segment blood vessel | 6.39e-07 | 5 |
subclavian artery | 6.39e-07 | 5 |