FFCP PHASE1:Hg19::chr15:42694534..42694544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=P20807,Q9BQC8 | |UniProt=P20807,Q9BQC8 | ||
|association_with_transcript=-43bp_to_ENST00000397200,ENST00000466222,NM_173088,uc001zpq.1_5end | |association_with_transcript=-43bp_to_ENST00000397200,ENST00000466222,NM_173088,uc001zpq.1_5end | ||
|cluster_id=chr15:42694534..42694544,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_15_at_CAPN3_5end | |description=CAGE_peak_15_at_CAPN3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!6.39e-27!10;CL:0000541!6.39e-27!10;CL:0000147!3.15e-19!14;CL:0002567!2.10e-15!3;CL:0000710!1.93e-13!20;CL:0002566!4.06e-12!1;CL:0000810!6.26e-12!1;CL:0000895!6.26e-12!1;CL:0002436!6.26e-12!1;CL:0002427!6.26e-12!1;CL:0002428!6.26e-12!1;CL:0002429!6.26e-12!1;CL:0002433!6.26e-12!1;CL:0002431!6.26e-12!1;CL:0002432!6.26e-12!1;CL:0000075!6.31e-10!27;CL:0002077!4.29e-08!33;CL:0000325!8.03e-07!39 | |ontology_enrichment_celltype=CL:0000148!6.39e-27!10;CL:0000541!6.39e-27!10;CL:0000147!3.15e-19!14;CL:0002567!2.10e-15!3;CL:0000710!1.93e-13!20;CL:0002566!4.06e-12!1;CL:0000810!6.26e-12!1;CL:0000895!6.26e-12!1;CL:0002436!6.26e-12!1;CL:0002427!6.26e-12!1;CL:0002428!6.26e-12!1;CL:0002429!6.26e-12!1;CL:0002433!6.26e-12!1;CL:0002431!6.26e-12!1;CL:0002432!6.26e-12!1;CL:0000075!6.31e-10!27;CL:0002077!4.29e-08!33;CL:0000325!8.03e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.63e-82;10!CL:0000147;7.26e-59;14!CL:0002567;1.22e-44;3!CL:0000710;1.91e-41;20!CL:0002566;5.97e-34;1!CL:0000075;6.88e-31;27!CL:0002077;2.90e-22;34 | |ontology_enrichment_celltype_v019=CL:0000148;4.63e-82;10!CL:0000147;7.26e-59;14!CL:0002567;1.22e-44;3!CL:0000710;1.91e-41;20!CL:0002566;5.97e-34;1!CL:0000075;6.88e-31;27!CL:0002077;2.90e-22;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.03e-82,10;CL:0000541,5.03e-82,10;CL:0000147,7.71e-59,14;CL:0002567,1.22e-44,3;CL:0000710,1.99e-41,20;CL:0002566,7.06e-34,1;CL:0000075,7.10e-31,27;CL:0002077,1.18e-24,34;CL:0000333,1.27e-19,41;CL:0000133,5.41e-14,59;CL:0000221,1.28e-11,72 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.87e-18;2!CL:0000133;7.14e-09;59 | |ontology_enrichment_development_v019=UBERON:0007297;9.87e-18;2!CL:0000133;7.14e-09;59 | ||
|ontology_enrichment_disease=DOID:3369!5.62e-12!1 | |ontology_enrichment_disease=DOID:3369!5.62e-12!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!3.65e-12!1 | |ontology_enrichment_uberon=UBERON:0001301!3.65e-12!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,5.05e-34,1;UBERON:0006947,2.59e-12,3;UBERON:0004054,2.59e-12,3;UBERON:0005904,1.44e-09,4 | |||
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|short_description=p15@CAPN3 | |short_description=p15@CAPN3 | ||
}} | }} |
Latest revision as of 15:57, 17 September 2015
Short description: | p15@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CAPN3_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | -43bp_to_ENST00000397200, ENST00000466222, NM_173088, uc001zpq.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | P20807Q9BQC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.03e-82 | 10 |
melanoblast | 5.03e-82 | 10 |
pigment cell | 7.71e-59 | 14 |
light melanocyte | 1.22e-44 | 3 |
neurecto-epithelial cell | 1.99e-41 | 20 |
dark melanocyte | 7.06e-34 | 1 |
columnar/cuboidal epithelial cell | 7.10e-31 | 27 |
ecto-epithelial cell | 1.18e-24 | 34 |
migratory neural crest cell | 1.27e-19 | 41 |
neurectodermal cell | 5.41e-14 | 59 |
ectodermal cell | 1.28e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
epididymis | 5.05e-34 | 1 |
male genital duct | 2.59e-12 | 3 |
internal male genitalia | 2.59e-12 | 3 |
duct of male reproductive system | 1.44e-09 | 4 |