FFCP PHASE1:Hg19::chr15:42694546..42694554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=P20807,Q9BQC8 | |UniProt=P20807,Q9BQC8 | ||
|association_with_transcript=-33bp_to_ENST00000397200,ENST00000466222,NM_173088,uc001zpq.1_5end | |association_with_transcript=-33bp_to_ENST00000397200,ENST00000466222,NM_173088,uc001zpq.1_5end | ||
|cluster_id=chr15:42694546..42694554,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_18_at_CAPN3_5end | |description=CAGE_peak_18_at_CAPN3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!3.02e-45!10;CL:0000541!3.02e-45!10;CL:0002567!1.26e-38!3;CL:0000147!2.78e-32!14;CL:0000710!1.54e-22!20;CL:0000075!1.25e-16!27;CL:0002566!3.98e-14!1;CL:0002077!1.49e-13!33;CL:0002127!1.61e-13!1;CL:0000914!1.61e-13!1;CL:0000911!1.61e-13!1;CL:0000814!1.61e-13!1;CL:0002042!1.61e-13!1;CL:0002039!1.61e-13!1;CL:0002040!1.61e-13!1;CL:0002041!1.61e-13!1;CL:1001319!1.83e-13!1;CL:1000600!1.83e-13!1;CL:0000325!2.04e-11!39;CL:0000333!2.54e-10!41;CL:0000133!1.40e-09!59;CL:0000221!6.69e-08!71;CL:0000893!2.12e-07!2;CL:0002489!2.12e-07!2;CL:0000809!2.12e-07!2;CL:0000808!2.12e-07!2;CL:0000894!2.12e-07!2;CL:0000806!2.12e-07!2;CL:0000807!2.12e-07!2;CL:0000805!2.12e-07!2;CL:0002425!2.12e-07!2 | |ontology_enrichment_celltype=CL:0000148!3.02e-45!10;CL:0000541!3.02e-45!10;CL:0002567!1.26e-38!3;CL:0000147!2.78e-32!14;CL:0000710!1.54e-22!20;CL:0000075!1.25e-16!27;CL:0002566!3.98e-14!1;CL:0002077!1.49e-13!33;CL:0002127!1.61e-13!1;CL:0000914!1.61e-13!1;CL:0000911!1.61e-13!1;CL:0000814!1.61e-13!1;CL:0002042!1.61e-13!1;CL:0002039!1.61e-13!1;CL:0002040!1.61e-13!1;CL:0002041!1.61e-13!1;CL:1001319!1.83e-13!1;CL:1000600!1.83e-13!1;CL:0000325!2.04e-11!39;CL:0000333!2.54e-10!41;CL:0000133!1.40e-09!59;CL:0000221!6.69e-08!71;CL:0000893!2.12e-07!2;CL:0002489!2.12e-07!2;CL:0000809!2.12e-07!2;CL:0000808!2.12e-07!2;CL:0000894!2.12e-07!2;CL:0000806!2.12e-07!2;CL:0000807!2.12e-07!2;CL:0000805!2.12e-07!2;CL:0002425!2.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.84e-98;3!CL:0000148;4.62e-82;10!CL:0000147;7.25e-59;14!CL:0000710;1.91e-41;20!CL:0002566;5.97e-34;1!CL:0000075;6.88e-31;27!CL:0002077;2.52e-20;34 | |ontology_enrichment_celltype_v019=CL:0002567;1.84e-98;3!CL:0000148;4.62e-82;10!CL:0000147;7.25e-59;14!CL:0000710;1.91e-41;20!CL:0002566;5.97e-34;1!CL:0000075;6.88e-31;27!CL:0002077;2.52e-20;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.17e-98,3;CL:0000148,3.60e-82,10;CL:0000541,3.60e-82,10;CL:0000147,6.06e-59,14;CL:0000710,1.68e-41,20;CL:0002566,3.61e-34,1;CL:0000075,6.27e-31,27;CL:0002077,1.07e-24,34;CL:0000333,1.17e-19,41;CL:0000133,5.12e-14,59;CL:0000221,1.22e-11,72 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.86e-18;2!CL:0000133;3.54e-09;59 | |ontology_enrichment_development_v019=UBERON:0007297;9.86e-18;2!CL:0000133;3.54e-09;59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!5.85e-14!1;UBERON:0004645!1.83e-13!1;UBERON:0001256!1.83e-13!1;UBERON:0001259!1.83e-13!1;UBERON:0001255!2.25e-07!2;UBERON:0001556!2.25e-07!2 | |ontology_enrichment_uberon=UBERON:0001301!5.85e-14!1;UBERON:0004645!1.83e-13!1;UBERON:0001256!1.83e-13!1;UBERON:0001259!1.83e-13!1;UBERON:0001255!2.25e-07!2;UBERON:0001556!2.25e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0001301;5.97e-34;1!UBERON:0006947;2.74e-12;3!UBERON:0004054;2.74e-12;3!UBERON:0005904;1.50e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,9.85e-34,1;UBERON:0006947,3.24e-12,3;UBERON:0004054,3.24e-12,3;UBERON:0005904,1.70e-09,4 | |||
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|short_description=p18@CAPN3 | |short_description=p18@CAPN3 | ||
}} | }} |
Latest revision as of 15:57, 17 September 2015
Short description: | p18@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CAPN3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -33bp_to_ENST00000397200, ENST00000466222, NM_173088, uc001zpq.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | P20807Q9BQC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.17e-98 | 3 |
melanocyte | 3.60e-82 | 10 |
melanoblast | 3.60e-82 | 10 |
pigment cell | 6.06e-59 | 14 |
neurecto-epithelial cell | 1.68e-41 | 20 |
dark melanocyte | 3.61e-34 | 1 |
columnar/cuboidal epithelial cell | 6.27e-31 | 27 |
ecto-epithelial cell | 1.07e-24 | 34 |
migratory neural crest cell | 1.17e-19 | 41 |
neurectodermal cell | 5.12e-14 | 59 |
ectodermal cell | 1.22e-11 | 72 |
Ontology term | p-value | n |
---|---|---|
epididymis | 9.85e-34 | 1 |
male genital duct | 3.24e-12 | 3 |
internal male genitalia | 3.24e-12 | 3 |
duct of male reproductive system | 1.70e-09 | 4 |