FFCP PHASE1:Hg19::chr15:42703153..42703165,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-21bp_to_AF147441_5end | |||
|cluster_id=chr15:42703153..42703165,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_12_at_CAPN3_5end | |||
|id=chr15:42703153..42703165,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.04e-12!10;CL:0000541!1.04e-12!10;CL:0002567!1.09e-11!3;CL:0000147!4.03e-09!14;CL:0002566!1.07e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002567;6.39e-53;3!CL:0000148;9.54e-17;10!CL:0000147;2.82e-12;14!CL:0000710;6.69e-09;20!CL:0000075;7.67e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.39e-53,3;CL:0000148,9.54e-17,10;CL:0000541,9.54e-17,10;CL:0000147,2.82e-12,14;CL:0000710,6.69e-09,20;CL:0000075,7.67e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.90e-17;10!UBERON:0005564;5.90e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!6.23e-17!2;UBERON:0005090!6.23e-17!2;UBERON:0001049!1.24e-16!57;UBERON:0005068!1.24e-16!57;UBERON:0006241!1.24e-16!57;UBERON:0007135!1.24e-16!57;UBERON:0002308!1.52e-13!9;UBERON:0000125!1.52e-13!9;UBERON:0002020!1.21e-12!34;UBERON:0003528!1.21e-12!34;UBERON:0003075!2.32e-12!86;UBERON:0007284!2.32e-12!86;UBERON:0007023!3.52e-12!115;UBERON:0002346!1.02e-11!90;UBERON:0002240!1.74e-11!3;UBERON:0006331!5.16e-11!3;UBERON:0002771!5.71e-11!3;UBERON:0002616!6.79e-11!59;UBERON:0001017!7.61e-11!82;UBERON:0002780!2.10e-10!41;UBERON:0001890!2.10e-10!41;UBERON:0006240!2.10e-10!41;UBERON:0005743!2.94e-10!86;UBERON:0009663!3.22e-10!7;UBERON:0003080!3.88e-10!42;UBERON:0002791!4.78e-10!33;UBERON:0001893!9.73e-10!34;UBERON:0002426!2.40e-09!1;UBERON:0003831!2.40e-09!1;UBERON:0003898!2.40e-09!1;UBERON:0004830!2.40e-09!1;UBERON:0001774!2.40e-09!1;UBERON:0003830!2.40e-09!1;UBERON:0005175!2.40e-09!1;UBERON:0003897!2.40e-09!1;UBERON:0001103!2.40e-09!1;UBERON:0010084!2.40e-09!1;UBERON:0005418!2.60e-09!1;UBERON:0001389!2.60e-09!1;UBERON:0000026!2.60e-09!1;UBERON:0008784!2.60e-09!1;UBERON:0006058!2.60e-09!1;UBERON:0003663!2.60e-09!1;UBERON:0001383!2.60e-09!1;UBERON:0004256!2.60e-09!1;UBERON:0002529!2.60e-09!1;UBERON:0004708!2.60e-09!1;UBERON:0002101!2.60e-09!1;UBERON:0004709!2.60e-09!1;UBERON:0003661!2.60e-09!1;UBERON:0002471!2.60e-09!1;UBERON:0004357!2.60e-09!1;UBERON:0009872!2.60e-09!1;UBERON:0004347!2.60e-09!1;UBERON:0005420!2.60e-09!1;UBERON:0005732!2.60e-09!1;UBERON:0006057!2.60e-09!1;UBERON:0000978!2.60e-09!1;UBERON:0002103!2.60e-09!1;UBERON:0001665!2.60e-09!1;UBERON:0003823!2.60e-09!1;UBERON:0000154!2.60e-09!1;UBERON:0005733!2.60e-09!1;UBERON:0005730!2.60e-09!1;UBERON:0002135!3.88e-09!1;UBERON:0000073!4.09e-09!94;UBERON:0001016!4.09e-09!94;UBERON:0003112!4.91e-09!1;UBERON:0000032!4.91e-09!1;UBERON:0005253!4.91e-09!1;UBERON:0003128!4.91e-09!1;UBERON:0002241!4.91e-09!1;UBERON:0001703!4.91e-09!1;UBERON:0004761!4.91e-09!1;UBERON:0009617!4.91e-09!1;UBERON:0002298!5.27e-09!8;UBERON:0000955!5.79e-09!69;UBERON:0006238!5.79e-09!69;UBERON:0002038!6.22e-09!1;UBERON:0009661!6.22e-09!1;UBERON:0001882!9.91e-09!1;UBERON:0005403!9.91e-09!1;UBERON:0003076!2.24e-08!15;UBERON:0003057!2.24e-08!15;UBERON:0002420!4.66e-08!9;UBERON:0007245!4.66e-08!9;UBERON:0010009!4.66e-08!9;UBERON:0010011!4.66e-08!9;UBERON:0000454!4.66e-08!9;UBERON:0001869!1.03e-07!32;UBERON:0005174!3.16e-07!5;UBERON:0001137!3.16e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.64e-21;8!UBERON:0003135;1.62e-15;11!UBERON:0000991;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.64e-21,8;UBERON:0003135,1.62e-15,11;UBERON:0000991,1.27e-08,21;UBERON:0009196,1.27e-08,21;UBERON:0009117,1.27e-08,21;UBERON:0005564,1.27e-08,21;UBERON:0004176,2.82e-08,22;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22 | |||
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|short_description=p12@CAPN3 | |||
}} |
Latest revision as of 16:05, 17 September 2015
Short description: | p12@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CAPN3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -21bp_to_AF147441_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.39e-53 | 3 |
melanocyte | 9.54e-17 | 10 |
melanoblast | 9.54e-17 | 10 |
pigment cell | 2.82e-12 | 14 |
neurecto-epithelial cell | 6.69e-09 | 20 |
columnar/cuboidal epithelial cell | 7.67e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |