FFCP PHASE1:Hg19::chr9:72658490..72658502,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256691 | |EntrezGene=256691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23673 | |HGNC=23673 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z304 | |UniProt=Q7Z304 | ||
|association_with_transcript=0bp_to_ENST00000377182,NM_153267,uc004ahm.2,uc004ahn.2_5end | |association_with_transcript=0bp_to_ENST00000377182,NM_153267,uc004ahm.2,uc004ahn.2_5end | ||
|cluster_id=chr9:72658490..72658502,+ | |||
|coexpression_cluster_id=C165 | |coexpression_cluster_id=C165 | ||
|description=CAGE_peak_7_at_MAMDC2_5end | |description=CAGE_peak_7_at_MAMDC2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!2.35e-07!9 | |ontology_enrichment_celltype=CL:0000188!2.35e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000306;1.01e-12;4!CL:0002222;1.01e-12;4!CL:0002224;1.01e-12;4!CL:0002617;3.22e-11;2!CL:0000136;2.87e-10;13!CL:0000075;9.63e-09;27!CL:0002615;1.75e-08;3!CL:0000064;9.18e-08;3!CL:0000067;9.18e-08;3!CL:0005012;9.18e-08;3!CL:0002304;9.18e-08;3!CL:0002616;5.13e-07;1!CL:0000511;8.72e-07;1!CL:0002625;8.72e-07;1!CL:0000222;8.72e-07;1!CL:0000216;8.72e-07;1 | |ontology_enrichment_celltype_v019=CL:0000306;1.01e-12;4!CL:0002222;1.01e-12;4!CL:0002224;1.01e-12;4!CL:0002617;3.22e-11;2!CL:0000136;2.87e-10;13!CL:0000075;9.63e-09;27!CL:0002615;1.75e-08;3!CL:0000064;9.18e-08;3!CL:0000067;9.18e-08;3!CL:0005012;9.18e-08;3!CL:0002304;9.18e-08;3!CL:0002616;5.13e-07;1!CL:0000511;8.72e-07;1!CL:0002625;8.72e-07;1!CL:0000222;8.72e-07;1!CL:0000216;8.72e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.03e-12,4;CL:0002222,1.03e-12,4;CL:0002224,1.03e-12,4;CL:0002617,1.80e-11,2;CL:0000136,6.03e-09,15;CL:0000075,1.19e-08,27;CL:0002615,1.72e-08,3;CL:0000064,1.49e-07,3;CL:0000067,1.49e-07,3;CL:0005012,1.49e-07,3;CL:0002304,1.49e-07,3;CL:0002616,5.13e-07,1;CL:0000511,9.48e-07,1;CL:0002625,9.48e-07,1;CL:0000216,9.48e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.58e-07;1 | |ontology_enrichment_development_v019=UBERON:0006242;5.58e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;4.09e-07;1!DOID:2513;8.72e-07;1 | |ontology_enrichment_disease_v019=DOID:6193;4.09e-07;1!DOID:2513;8.72e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,4.09e-07,1;DOID:2513,8.49e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.41e-08!9;UBERON:0003886!6.12e-07!63;UBERON:0000488!6.95e-07!4;UBERON:0007625!7.62e-07!11 | |ontology_enrichment_uberon=UBERON:0001737!1.41e-08!9;UBERON:0003886!6.12e-07!63;UBERON:0000488!6.95e-07!4;UBERON:0007625!7.62e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.01e-12;4!UBERON:0005389;1.01e-12;4!UBERON:0000484;1.01e-12;4!UBERON:0000965;1.01e-12;4!UBERON:0001803;1.01e-12;4!UBERON:0007625;7.95e-12;11!UBERON:0005406;8.73e-12;2!UBERON:0000019;2.06e-09;19!UBERON:0000047;2.06e-09;19!UBERON:0004088;2.06e-09;19!UBERON:0010230;2.06e-09;19!UBERON:0001801;3.06e-09;14!UBERON:0000970;6.50e-09;20!UBERON:0002104;1.84e-08;21!UBERON:0001456;1.84e-08;21!UBERON:0001778;9.18e-08;3!UBERON:0001775;9.18e-08;3!UBERON:0000020;1.12e-07;23!UBERON:0001032;2.48e-07;24!UBERON:0004456;2.48e-07;24!UBERON:0001136;8.72e-07;1!UBERON:0001343;8.72e-07;1!UBERON:0004910;8.72e-07;1!UBERON:0004813;8.72e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0010077;1.01e-12;4!UBERON:0005389;1.01e-12;4!UBERON:0000484;1.01e-12;4!UBERON:0000965;1.01e-12;4!UBERON:0001803;1.01e-12;4!UBERON:0007625;7.95e-12;11!UBERON:0005406;8.73e-12;2!UBERON:0000019;2.06e-09;19!UBERON:0000047;2.06e-09;19!UBERON:0004088;2.06e-09;19!UBERON:0010230;2.06e-09;19!UBERON:0001801;3.06e-09;14!UBERON:0000970;6.50e-09;20!UBERON:0002104;1.84e-08;21!UBERON:0001456;1.84e-08;21!UBERON:0001778;9.18e-08;3!UBERON:0001775;9.18e-08;3!UBERON:0000020;1.12e-07;23!UBERON:0001032;2.48e-07;24!UBERON:0004456;2.48e-07;24!UBERON:0001136;8.72e-07;1!UBERON:0001343;8.72e-07;1!UBERON:0004910;8.72e-07;1!UBERON:0004813;8.72e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.03e-12,4;UBERON:0005389,1.03e-12,4;UBERON:0000484,1.03e-12,4;UBERON:0002546,1.03e-12,4;UBERON:0000965,1.03e-12,4;UBERON:0001803,1.03e-12,4;UBERON:0003073,1.03e-12,4;UBERON:0005426,1.03e-12,4;UBERON:0005406,8.06e-12,2;UBERON:0007625,1.11e-11,11;UBERON:0001801,3.97e-09,14;UBERON:0000019,8.22e-09,20;UBERON:0000047,8.22e-09,20;UBERON:0010312,8.22e-09,20;UBERON:0004088,8.22e-09,20;UBERON:0010230,8.22e-09,20;UBERON:0003072,8.22e-09,20;UBERON:0004128,8.22e-09,20;UBERON:0003071,8.22e-09,20;UBERON:0000970,2.30e-08,21;UBERON:0002104,2.30e-08,21;UBERON:0001456,5.85e-08,22;UBERON:0001778,1.49e-07,3;UBERON:0001775,1.49e-07,3;UBERON:0005085,2.36e-07,31;UBERON:0000020,3.00e-07,24;UBERON:0001032,3.00e-07,24;UBERON:0004456,3.00e-07,24;UBERON:0001136,9.48e-07,1;UBERON:0001343,9.48e-07,1;UBERON:0004910,9.48e-07,1;UBERON:0005154,9.48e-07,1;UBERON:0005295,9.48e-07,1;UBERON:0004813,9.48e-07,1;UBERON:0005297,9.48e-07,1;UBERON:0005294,9.48e-07,1;UBERON:0010141,9.48e-07,1;UBERON:0005891,9.48e-07,1 | |||
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| ||
|short_description=p7@MAMDC2 | |short_description=p7@MAMDC2 | ||
}} | }} |
Latest revision as of 17:32, 17 September 2015
Short description: | p7@MAMDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MAMDC2_5end |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | 0bp_to_ENST00000377182, NM_153267, uc004ahm.2, uc004ahn.2_5end |
EntrezGene: | MAMDC2 |
HGNC: | 23673 |
UniProt: | Q7Z304 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.03e-12 | 4 |
vertebrate lens cell | 1.03e-12 | 4 |
lens epithelial cell | 1.03e-12 | 4 |
adipocyte of breast | 1.80e-11 | 2 |
fat cell | 6.03e-09 | 15 |
columnar/cuboidal epithelial cell | 1.19e-08 | 27 |
adipocyte of omentum tissue | 1.72e-08 | 3 |
ciliated cell | 1.49e-07 | 3 |
ciliated epithelial cell | 1.49e-07 | 3 |
multi-ciliated epithelial cell | 1.49e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.49e-07 | 3 |
perirenal adipocyte cell | 5.13e-07 | 1 |
androgen binding protein secreting cell | 9.48e-07 | 1 |
seminiferous tubule epithelial cell | 9.48e-07 | 1 |
Sertoli cell | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.09e-07 | 1 |
basal cell carcinoma | 8.49e-07 | 1 |