FFCP PHASE1:Hg19::chr11:34533257..34533273,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2001 | |EntrezGene=2001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3320 | |HGNC=3320 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKW6,A8K443 | |UniProt=Q9UKW6,A8K443 | ||
|association_with_transcript=72bp_to_ENST00000312319,NM_001243081,NM_198381,uc001mvo.1_5end | |association_with_transcript=72bp_to_ENST00000312319,NM_001243081,NM_198381,uc001mvo.1_5end | ||
|cluster_id=chr11:34533257..34533273,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_4_at_ELF5_5end | |description=CAGE_peak_4_at_ELF5_5end | ||
|id=chr11:34533257..34533273,- | |id=chr11:34533257..34533273,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;8.10e-41;1!UBERON:0003918;3.24e-36;10!UBERON:0007687;3.24e-36;10!UBERON:0007297;3.44e-21;2!UBERON:0003104;1.05e-12;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.92e-29!2;UBERON:0001044!4.68e-22!6;UBERON:0003293!4.68e-22!6;UBERON:0003294!4.68e-22!6;UBERON:0010047!4.68e-22!6;UBERON:0000167!4.68e-22!6;UBERON:0006947!2.05e-20!3;UBERON:0004054!2.05e-20!3;UBERON:0001000!5.56e-16!1;UBERON:0005352!5.56e-16!1;UBERON:0000998!6.44e-16!1;UBERON:0006868!6.44e-16!1;UBERON:0001831!1.16e-15!1;UBERON:0001567!1.16e-15!1;UBERON:0008801!1.16e-15!1;UBERON:0001736!1.34e-15!1;UBERON:0006298!1.34e-15!1;UBERON:0005904!1.44e-15!4;UBERON:0003408!1.67e-13!10;UBERON:0000078!5.43e-13!18;UBERON:0000166!3.54e-11!21;UBERON:0000161!3.52e-10!35;UBERON:0007023!3.58e-09!115;UBERON:0004089!1.73e-08!2;UBERON:0000165!1.92e-08!28;UBERON:0000930!1.92e-08!28;UBERON:0000341!2.31e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.28e-53;3!UBERON:0004054;1.28e-53;3!UBERON:0001000;8.10e-41;1!UBERON:0000998;8.10e-41;1!UBERON:0006868;8.10e-41;1!UBERON:0005352;8.10e-41;1!UBERON:0005904;1.48e-40;4!UBERON:0000058;5.90e-17;10!UBERON:0003135;1.62e-15;11!UBERON:0004175;1.27e-08;21!UBERON:0003101;2.82e-08;22!UBERON:0000079;2.82e-08;22!UBERON:0001044;7.25e-08;6!UBERON:0003293;7.25e-08;6!UBERON:0003294;7.25e-08;6!UBERON:0010047;7.25e-08;6!UBERON:0003408;7.25e-08;6!UBERON:0000167;7.25e-08;6!UBERON:0002113;1.31e-07;24!UBERON:0011143;1.31e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.28e-53,3;UBERON:0004054,1.28e-53,3;UBERON:0001000,6.62e-41,1;UBERON:0005352,6.62e-41,1;UBERON:0000998,9.91e-41,1;UBERON:0006868,9.91e-41,1;UBERON:0005904,1.48e-40,4;UBERON:0003135,1.62e-15,11;UBERON:0002113,1.62e-14,26;UBERON:0003918,1.62e-14,26;UBERON:0011143,1.62e-14,26;UBERON:0005095,1.62e-14,26;UBERON:0007687,1.62e-14,26;UBERON:0000489,2.58e-12,31;UBERON:0000058,1.99e-09,19;UBERON:0006554,2.16e-08,47;UBERON:0003101,2.82e-08,22;UBERON:0000079,2.82e-08,22;UBERON:0001008,3.11e-08,48;UBERON:0001044,7.25e-08,6;UBERON:0003293,7.25e-08,6;UBERON:0003294,7.25e-08,6;UBERON:0010047,7.25e-08,6;UBERON:0000167,7.25e-08,6;UBERON:0005172,2.12e-07,54;UBERON:0005173,2.12e-07,54;UBERON:0004175,2.14e-07,25;UBERON:0002417,9.92e-07,60;UBERON:0000916,9.92e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68085686268659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60058834087354,2.46536564234491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,8.04435395362765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68085686268659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60058834087354,2.46536564234491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,8.04435395362765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@ELF5 | |short_description=p4@ELF5 | ||
}} | }} |
Latest revision as of 17:50, 17 September 2015
Short description: | p4@ELF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ELF5_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 72bp_to_ENST00000312319, NM_001243081, NM_198381, uc001mvo.1_5end |
EntrezGene: | ELF5 |
HGNC: | 3320 |
UniProt: | Q9UKW6A8K443 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.28e-53 | 3 |
internal male genitalia | 1.28e-53 | 3 |
vas deferens | 6.62e-41 | 1 |
spermatic cord | 6.62e-41 | 1 |
seminal vesicle | 9.91e-41 | 1 |
seminal fluid secreting gland | 9.91e-41 | 1 |
duct of male reproductive system | 1.48e-40 | 4 |
male reproductive organ | 1.62e-15 | 11 |
kidney | 1.62e-14 | 26 |
kidney mesenchyme | 1.62e-14 | 26 |
upper urinary tract | 1.62e-14 | 26 |
kidney rudiment | 1.62e-14 | 26 |
kidney field | 1.62e-14 | 26 |
cavitated compound organ | 2.58e-12 | 31 |
duct | 1.99e-09 | 19 |
urinary system structure | 2.16e-08 | 47 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
renal system | 3.11e-08 | 48 |
saliva-secreting gland | 7.25e-08 | 6 |
gland of oral region | 7.25e-08 | 6 |
gland of foregut | 7.25e-08 | 6 |
oral gland | 7.25e-08 | 6 |
oral cavity | 7.25e-08 | 6 |
abdomen element | 2.12e-07 | 54 |
abdominal segment element | 2.12e-07 | 54 |
internal genitalia | 2.14e-07 | 25 |
abdominal segment of trunk | 9.92e-07 | 60 |
abdomen | 9.92e-07 | 60 |