FFCP PHASE2:Hg19::chr1:156722252..156722268,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3068 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4856 |TSSclass...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4856 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5SZ07,P51858 | ||
|association_with_transcript=-12bp_to_ENST00000368206,NM_001126050,uc009wse.2,uc010phr.1_5end | |association_with_transcript=-12bp_to_ENST00000368206,NM_001126050,uc009wse.2,uc010phr.1_5end | ||
|cluster_id=chr1:156722252..156722268,- | |cluster_id=chr1:156722252..156722268,- | ||
Latest revision as of 18:01, 17 September 2015
| Short description: | p15@HDGF |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_15_at_HDGF_5end |
| Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
| Association with transcript: | -12bp_to_ENST00000368206, NM_001126050, uc009wse.2, uc010phr.1_5end |
| EntrezGene: | HDGF |
| HGNC: | 4856 |
| UniProt: | Q5SZ07P51858 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p15@HDGF |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 4.79e-23 | 5 |
| Merkel cell | 1.45e-15 | 2 |
| neuron | 7.58e-12 | 6 |
| neuroblast | 7.58e-12 | 6 |
| electrically signaling cell | 7.58e-12 | 6 |
| precursor B cell | 7.14e-11 | 3 |
| neuronal stem cell | 5.29e-09 | 8 |
| B-1 B cell | 1.27e-08 | 1 |
| epithelial cell of esophagus | 2.84e-08 | 1 |
| keratinocyte | 9.70e-07 | 5 |
Showing 1 to 10 of 10 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphatic system cancer | 1.27e-08 | 1 |
| lymphosarcoma | 1.27e-08 | 1 |
| acute leukemia | 1.98e-08 | 1 |
| lymphoma | 3.93e-07 | 10 |
Showing 1 to 4 of 4 entries
