FFCP PHASE1:Hg19::chr1:1567531..1567544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8510 | |EntrezGene=8510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7171 | |HGNC=7171 | ||
|TSSclassifier=strong | |||
|UniProt=D6REP6 | |UniProt=D6REP6 | ||
|association_with_transcript=0bp_to_ENST00000472264_5end | |association_with_transcript=0bp_to_ENST00000472264_5end | ||
|cluster_id=chr1:1567531..1567544,+ | |||
|coexpression_cluster_id=C2532 | |coexpression_cluster_id=C2532 | ||
|description=CAGE_peak_3_at_MMP23B_5end | |description=CAGE_peak_3_at_MMP23B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.95e-08;5!CL:0002504;1.01e-07;3!CL:1000279;1.01e-07;3!CL:1000280;1.01e-07;3 | |ontology_enrichment_celltype_v019=CL:0002322;5.95e-08;5!CL:0002504;1.01e-07;3!CL:1000279;1.01e-07;3!CL:1000280;1.01e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002504,5.97e-08,3;CL:1000279,5.97e-08,3;CL:1000280,5.97e-08,3;CL:0002322,6.56e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.25e-07;65 | |ontology_enrichment_development_v019=UBERON:0006603;1.25e-07;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.59e-08!115;UBERON:0000468!2.03e-07!659;UBERON:0003101!9.33e-07!22;UBERON:0000079!9.33e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!8.59e-08!115;UBERON:0000468!2.03e-07!659;UBERON:0003101!9.33e-07!22;UBERON:0000079!9.33e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;7.31e-10;49!UBERON:0003978;8.67e-09;3!UBERON:0000946;8.67e-09;3!UBERON:0000160;1.90e-07;17!UBERON:0005409;6.09e-07;22!UBERON:0003688;9.06e-07;6!UBERON:0002358;9.06e-07;6!UBERON:0003684;9.06e-07;6!UBERON:0001178;9.06e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000922;7.31e-10;49!UBERON:0003978;8.67e-09;3!UBERON:0000946;8.67e-09;3!UBERON:0000160;1.90e-07;17!UBERON:0005409;6.09e-07;22!UBERON:0003688;9.06e-07;6!UBERON:0002358;9.06e-07;6!UBERON:0003684;9.06e-07;6!UBERON:0001178;9.06e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.08e-08,3;UBERON:0009751,1.08e-08,3;UBERON:0000946,1.08e-08,3;UBERON:0002523,1.08e-08,3;UBERON:0005983,1.08e-08,3;UBERON:0002165,1.08e-08,3;UBERON:0002062,1.08e-08,3;UBERON:0007280,1.08e-08,3;UBERON:0000160,1.62e-07,17;UBERON:0003688,9.31e-07,6;UBERON:0002358,9.31e-07,6;UBERON:0003684,9.31e-07,6;UBERON:0001178,9.31e-07,6 | |||
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| ||
|short_description=p3@MMP23B | |short_description=p3@MMP23B | ||
}} | }} |
Latest revision as of 18:08, 17 September 2015
Short description: | p3@MMP23B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MMP23B_5end |
Coexpression cluster: | C2532_Mesenchymal_Hepatic_umbilical_ovary_amniotic_diaphragm_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000472264_5end |
EntrezGene: | MMP23B |
HGNC: | 7171 |
UniProt: | D6REP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 5.97e-08 | 3 |
smooth muscle cell of large intestine | 5.97e-08 | 3 |
smooth muscle cell of colon | 5.97e-08 | 3 |
embryonic stem cell | 6.56e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
valve | 1.08e-08 | 3 |
cardiac mesenchyme | 1.08e-08 | 3 |
cardial valve | 1.08e-08 | 3 |
tunica intima | 1.08e-08 | 3 |
heart layer | 1.08e-08 | 3 |
endocardium | 1.08e-08 | 3 |
endocardial cushion | 1.08e-08 | 3 |
presumptive endocardium | 1.08e-08 | 3 |
intestine | 1.62e-07 | 17 |
omentum | 9.31e-07 | 6 |
peritoneum | 9.31e-07 | 6 |
abdominal cavity | 9.31e-07 | 6 |
visceral peritoneum | 9.31e-07 | 6 |