FFCP PHASE1:Hg19::chr3:2139970..2140019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152330 | |EntrezGene=152330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2174 | |HGNC=2174 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMQ2 | |UniProt=C9JMQ2 | ||
|association_with_transcript=-477bp_to_ENST00000422330_5end | |association_with_transcript=-477bp_to_ENST00000422330_5end | ||
|cluster_id=chr3:2139970..2140019,+ | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_17_at_CNTN4_5end | |description=CAGE_peak_17_at_CNTN4_5end | ||
|id=chr3:2139970..2140019,+ | |id=chr3:2139970..2140019,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;7.05e-34;2!CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000047,1.47e-09,8;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!1.65e-08!1;DOID:4549!1.65e-08!1;DOID:5861!1.65e-08!1;DOID:6496!1.65e-08!1 | |ontology_enrichment_disease=DOID:3371!1.65e-08!1;DOID:4549!1.65e-08!1;DOID:5861!1.65e-08!1;DOID:6496!1.65e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.10e-31!32;UBERON:0001950!4.74e-30!20;UBERON:0001893!9.86e-30!34;UBERON:0002780!1.64e-28!41;UBERON:0001890!1.64e-28!41;UBERON:0006240!1.64e-28!41;UBERON:0003080!8.71e-28!42;UBERON:0002619!2.71e-27!22;UBERON:0001049!2.56e-26!57;UBERON:0005068!2.56e-26!57;UBERON:0006241!2.56e-26!57;UBERON:0007135!2.56e-26!57;UBERON:0002791!6.46e-26!33;UBERON:0002020!4.11e-25!34;UBERON:0003528!4.11e-25!34;UBERON:0000956!5.93e-24!25;UBERON:0000203!5.93e-24!25;UBERON:0001017!2.78e-22!82;UBERON:0002616!4.74e-22!59;UBERON:0007023!1.47e-21!115;UBERON:0003075!2.32e-21!86;UBERON:0007284!2.32e-21!86;UBERON:0003056!2.40e-21!61;UBERON:0005743!4.17e-21!86;UBERON:0000955!7.08e-21!69;UBERON:0006238!7.08e-21!69;UBERON:0002346!2.89e-20!90;UBERON:0000073!8.14e-19!94;UBERON:0001016!8.14e-19!94;UBERON:0001871!1.47e-13!7;UBERON:0000153!6.68e-13!129;UBERON:0007811!6.68e-13!129;UBERON:0000033!4.72e-12!123;UBERON:0004121!1.12e-11!169;UBERON:0000924!2.54e-11!173;UBERON:0006601!2.54e-11!173;UBERON:0000200!1.18e-10!6;UBERON:0002771!1.07e-09!3;UBERON:0000025!1.20e-08!194;UBERON:0007190!2.04e-08!1;UBERON:0002146!2.90e-08!1;UBERON:0005623!2.90e-08!1;UBERON:0001882!6.63e-08!1;UBERON:0005403!6.63e-08!1;UBERON:0002022!1.21e-07!1;UBERON:0002420!2.88e-07!9;UBERON:0007245!2.88e-07!9;UBERON:0010009!2.88e-07!9;UBERON:0010011!2.88e-07!9;UBERON:0000454!2.88e-07!9;UBERON:0000477!5.31e-07!286;UBERON:0000483!5.48e-07!309;UBERON:0000119!7.06e-07!312 | |ontology_enrichment_uberon=UBERON:0001869!1.10e-31!32;UBERON:0001950!4.74e-30!20;UBERON:0001893!9.86e-30!34;UBERON:0002780!1.64e-28!41;UBERON:0001890!1.64e-28!41;UBERON:0006240!1.64e-28!41;UBERON:0003080!8.71e-28!42;UBERON:0002619!2.71e-27!22;UBERON:0001049!2.56e-26!57;UBERON:0005068!2.56e-26!57;UBERON:0006241!2.56e-26!57;UBERON:0007135!2.56e-26!57;UBERON:0002791!6.46e-26!33;UBERON:0002020!4.11e-25!34;UBERON:0003528!4.11e-25!34;UBERON:0000956!5.93e-24!25;UBERON:0000203!5.93e-24!25;UBERON:0001017!2.78e-22!82;UBERON:0002616!4.74e-22!59;UBERON:0007023!1.47e-21!115;UBERON:0003075!2.32e-21!86;UBERON:0007284!2.32e-21!86;UBERON:0003056!2.40e-21!61;UBERON:0005743!4.17e-21!86;UBERON:0000955!7.08e-21!69;UBERON:0006238!7.08e-21!69;UBERON:0002346!2.89e-20!90;UBERON:0000073!8.14e-19!94;UBERON:0001016!8.14e-19!94;UBERON:0001871!1.47e-13!7;UBERON:0000153!6.68e-13!129;UBERON:0007811!6.68e-13!129;UBERON:0000033!4.72e-12!123;UBERON:0004121!1.12e-11!169;UBERON:0000924!2.54e-11!173;UBERON:0006601!2.54e-11!173;UBERON:0000200!1.18e-10!6;UBERON:0002771!1.07e-09!3;UBERON:0000025!1.20e-08!194;UBERON:0007190!2.04e-08!1;UBERON:0002146!2.90e-08!1;UBERON:0005623!2.90e-08!1;UBERON:0001882!6.63e-08!1;UBERON:0005403!6.63e-08!1;UBERON:0002022!1.21e-07!1;UBERON:0002420!2.88e-07!9;UBERON:0007245!2.88e-07!9;UBERON:0010009!2.88e-07!9;UBERON:0010011!2.88e-07!9;UBERON:0000454!2.88e-07!9;UBERON:0000477!5.31e-07!286;UBERON:0000483!5.48e-07!309;UBERON:0000119!7.06e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0002021;1.60e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0002021,1.60e-14,5 | |||
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|short_description=p17@CNTN4 | |short_description=p17@CNTN4 | ||
}} | }} |
Latest revision as of 18:31, 17 September 2015
Short description: | p17@CNTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CNTN4_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -477bp_to_ENST00000422330_5end |
EntrezGene: | CNTN4 |
HGNC: | 2174 |
UniProt: | C9JMQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
neuronal stem cell | 1.47e-09 | 8 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
occipital lobe | 1.60e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |