FFCP PHASE1:Hg19::chr3:2140427..2140437,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152330 | |EntrezGene=152330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2174 | |HGNC=2174 | ||
|TSSclassifier=strong | |||
|UniProt=C9JMQ2 | |UniProt=C9JMQ2 | ||
|association_with_transcript=-59bp_to_ENST00000422330_5end | |association_with_transcript=-59bp_to_ENST00000422330_5end | ||
|cluster_id=chr3:2140427..2140437,+ | |||
|description=CAGE_peak_9_at_CNTN4_5end | |description=CAGE_peak_9_at_CNTN4_5end | ||
|id=chr3:2140427..2140437,+ | |id=chr3:2140427..2140437,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.38e-09;2!CL:0000062;2.75e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.71e-09,2;CL:0000062,5.98e-07,11;CL:0000375,5.98e-07,11;CL:0000335,5.98e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.38e-09;2!CL:0000335;6.16e-07;11!UBERON:0006215;8.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.66e-18;1!DOID:4549;2.66e-18;1!DOID:5861;2.66e-18;1!DOID:6496;2.66e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.66e-18,1;DOID:4549,2.66e-18,1;DOID:5861,2.66e-18,1;DOID:6496,2.66e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.47e-39!115;UBERON:0003075!4.64e-27!86;UBERON:0007284!4.64e-27!86;UBERON:0002346!7.33e-27!90;UBERON:0001049!2.46e-26!57;UBERON:0005068!2.46e-26!57;UBERON:0006241!2.46e-26!57;UBERON:0007135!2.46e-26!57;UBERON:0002616!4.12e-25!59;UBERON:0000955!6.31e-24!69;UBERON:0006238!6.31e-24!69;UBERON:0002780!7.63e-22!41;UBERON:0001890!7.63e-22!41;UBERON:0006240!7.63e-22!41;UBERON:0003056!1.58e-21!61;UBERON:0003080!3.74e-21!42;UBERON:0001893!1.51e-20!34;UBERON:0002020!1.89e-20!34;UBERON:0003528!1.89e-20!34;UBERON:0001017!6.31e-20!82;UBERON:0005743!1.03e-19!86;UBERON:0002791!3.84e-19!33;UBERON:0002619!1.01e-18!22;UBERON:0001869!2.07e-18!32;UBERON:0000073!6.55e-18!94;UBERON:0001016!6.55e-18!94;UBERON:0000956!5.30e-16!25;UBERON:0000203!5.30e-16!25;UBERON:0001950!9.89e-16!20;UBERON:0000153!2.06e-15!129;UBERON:0007811!2.06e-15!129;UBERON:0000033!8.07e-15!123;UBERON:0000064!1.88e-14!219;UBERON:0000924!6.05e-13!173;UBERON:0006601!6.05e-13!173;UBERON:0004121!9.87e-13!169;UBERON:0000062!1.04e-09!511;UBERON:0004733!1.85e-08!12;UBERON:0002028!1.85e-08!12;UBERON:0007277!1.85e-08!12;UBERON:0000483!7.83e-08!309;UBERON:0000481!8.31e-08!347;UBERON:0004732!1.09e-07!13;UBERON:0000119!1.29e-07!312;UBERON:0000200!2.75e-07!6;UBERON:0001871!3.22e-07!7;UBERON:0002298!3.34e-07!8;UBERON:0000025!5.30e-07!194;UBERON:0000922!7.25e-07!612;UBERON:0002680!8.75e-07!9;UBERON:0001895!8.75e-07!9;UBERON:0010092!8.75e-07!9;UBERON:0002050!9.89e-07!605;UBERON:0005423!9.89e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;5.99e-09;18!UBERON:0002418;5.80e-07;3!UBERON:0004755;5.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,5.80e-07,3;UBERON:0004755,5.80e-07,3 | |||
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| ||
|short_description=p9@CNTN4 | |short_description=p9@CNTN4 | ||
}} | }} |
Latest revision as of 18:36, 17 September 2015
Short description: | p9@CNTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CNTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000422330_5end |
EntrezGene: | CNTN4 |
HGNC: | 2174 |
UniProt: | C9JMQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.71e-09 | 2 |
osteoblast | 5.98e-07 | 11 |
osteoprogenitor cell | 5.98e-07 | 11 |
mesenchyme condensation cell | 5.98e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 5.80e-07 | 3 |
skeletal tissue | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.66e-18 | 1 |
extraosseous chondrosarcoma | 2.66e-18 | 1 |
myxoid chondrosarcoma | 2.66e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 2.66e-18 | 1 |