FFCP PHASE1:Hg19::chr2:160143084..160143102,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151525 | |EntrezGene=151525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26697 | |HGNC=26697 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9V3,D3DPA6 | |UniProt=Q8N9V3,D3DPA6 | ||
|association_with_transcript=0bp_to_ENST00000409990,NM_001128213,uc002uak.3_5end | |association_with_transcript=0bp_to_ENST00000409990,NM_001128213,uc002uak.3_5end | ||
|cluster_id=chr2:160143084..160143102,- | |||
|description=CAGE_peak_4_at_WDSUB1_5end | |description=CAGE_peak_4_at_WDSUB1_5end | ||
|id=chr2:160143084..160143102,- | |id=chr2:160143084..160143102,- | ||
|ontology_enrichment_celltype=CL:0000066!4.91e-12!254;CL:0002076!1.96e-09!43;CL:0000223!3.03e-08!59;CL:0000039!5.22e-07!7;CL:0000586!5.22e-07!7 | |ontology_enrichment_celltype=CL:0000066!4.91e-12!254;CL:0002076!1.96e-09!43;CL:0000223!3.03e-08!59;CL:0000039!5.22e-07!7;CL:0000586!5.22e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.00e-07;7!CL:0000586;4.00e-07;7!CL:0002076;7.27e-07;42 | |ontology_enrichment_celltype_v019=CL:0000039;4.00e-07;7!CL:0000586;4.00e-07;7!CL:0002076;7.27e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.87e-07,42;CL:0000039,5.46e-07,7;CL:0000586,5.46e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.17e-07;2 | |ontology_enrichment_development_v019=UBERON:0007297;9.17e-07;2 | ||
|ontology_enrichment_disease=DOID:305!8.14e-21!106;DOID:0050687!3.30e-13!143;DOID:1749!8.67e-12!14;DOID:299!2.13e-07!25 | |ontology_enrichment_disease=DOID:305!8.14e-21!106;DOID:0050687!3.30e-13!143;DOID:1749!8.67e-12!14;DOID:299!2.13e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;1.19e-07;25!DOID:3493;9.17e-07;2 | |ontology_enrichment_disease_v019=DOID:299;1.19e-07;25!DOID:3493;9.17e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.97e-10,106;DOID:0050687,1.45e-08,143;DOID:299,1.24e-07,25;DOID:1749,5.37e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.60e-17!169;UBERON:0000925!5.60e-17!169;UBERON:0006595!5.60e-17!169;UBERON:0001007!7.32e-14!155;UBERON:0001555!7.32e-14!155;UBERON:0007026!7.32e-14!155;UBERON:0004921!3.35e-13!129;UBERON:0004185!3.35e-13!129;UBERON:0000077!6.92e-12!130;UBERON:0001004!5.35e-10!72;UBERON:0001041!2.81e-09!98;UBERON:0005631!2.27e-08!14;UBERON:0000158!2.27e-08!14;UBERON:0000065!5.30e-08!53;UBERON:0005409!1.18e-07!35;UBERON:0003133!1.51e-07!48;UBERON:0005156!1.73e-07!59;UBERON:0000990!1.73e-07!59;UBERON:0003135!2.64e-07!11;UBERON:0000974!3.00e-07!10;UBERON:0007023!3.98e-07!115;UBERON:0004175!4.77e-07!25;UBERON:0005153!7.24e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!5.60e-17!169;UBERON:0000925!5.60e-17!169;UBERON:0006595!5.60e-17!169;UBERON:0001007!7.32e-14!155;UBERON:0001555!7.32e-14!155;UBERON:0007026!7.32e-14!155;UBERON:0004921!3.35e-13!129;UBERON:0004185!3.35e-13!129;UBERON:0000077!6.92e-12!130;UBERON:0001004!5.35e-10!72;UBERON:0001041!2.81e-09!98;UBERON:0005631!2.27e-08!14;UBERON:0000158!2.27e-08!14;UBERON:0000065!5.30e-08!53;UBERON:0005409!1.18e-07!35;UBERON:0003133!1.51e-07!48;UBERON:0005156!1.73e-07!59;UBERON:0000990!1.73e-07!59;UBERON:0003135!2.64e-07!11;UBERON:0000974!3.00e-07!10;UBERON:0007023!3.98e-07!115;UBERON:0004175!4.77e-07!25;UBERON:0005153!7.24e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.81e-10;22!UBERON:0004921;2.82e-10;33!UBERON:0002108;3.33e-09;4!UBERON:0006947;3.87e-09;3!UBERON:0004054;3.87e-09;3!UBERON:0001829;3.68e-07;2!UBERON:0001987;4.50e-07;4!UBERON:0001041;4.71e-07;14!UBERON:0005904;6.03e-07;4!UBERON:0000007;6.66e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0005409;2.81e-10;22!UBERON:0004921;2.82e-10;33!UBERON:0002108;3.33e-09;4!UBERON:0006947;3.87e-09;3!UBERON:0004054;3.87e-09;3!UBERON:0001829;3.68e-07;2!UBERON:0001987;4.50e-07;4!UBERON:0001041;4.71e-07;14!UBERON:0005904;6.03e-07;4!UBERON:0000007;6.66e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,8.08e-10,160;UBERON:0000925,8.08e-10,160;UBERON:0006595,8.08e-10,160;UBERON:0006947,7.66e-09,3;UBERON:0004054,7.66e-09,3;UBERON:0002108,7.67e-09,4;UBERON:0005409,8.47e-09,25;UBERON:0004175,8.89e-08,25;UBERON:0001987,3.44e-07,4;UBERON:0004340,3.44e-07,4;UBERON:0001829,3.60e-07,2;UBERON:0005631,7.51e-07,14;UBERON:0000158,7.51e-07,14;UBERON:0003124,8.60e-07,7;UBERON:0000007,9.23e-07,2;UBERON:0000160,9.95e-07,17;UBERON:0005904,9.96e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0.290796477559129,0.377875943688809,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0.661044872784862,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0,0,0,0.393010762749165,0.411202997999018,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.286804595389004,0.609868530647977,0,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,1.96781501668982,0,0.219500570817251,0,0.502644862058154,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,2.81201501960331,0,0.567100388969546,0.626909658919938,0.581267877027924,0.383382679165211,0,0.088048434013226,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0.303127571446259,1.66435439510497,1.5119514666484,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,1.69203229428271,0,1.28913384510255,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,1.98341898433174,0.768760269460425,1.27612712494584,1.11273558941105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.865999014529609,0.670302275535787,0,2.44773882019626,0,0,0,0.689170200620878,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,1.96032172784825,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0.71623345421307,6.83018765915069,0.614321404198464,0,0.140669416410513,0,0,0.844501632511974,0,0.552567831062295,0.251932747854276,0,0,0,0.179736702294654,0.895105873378046,0,0.493217028184668,0,0,0,0,0,1.5625665665114,2.0990399999087,2.89999830173917,0.455173793141999,0.254253650292766,1.18193840883968,0,0,0,0,0.60298219312704,0,0.884634079449797,0.295547618953547,0,0.435753854075961,2.37020365273626,0.230850775511391,0,0.69169171316418,2.06442582142476,7.27937391877454,0.638002319463839,0.549585560411174,1.5991043280559,0,0,0,0,0,0,0,0,0.421996129056054,0.489698424477443,2.82706142867882,0,0.995261931078505,0.884575645033392,1.83309043480088,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0.242780379534093,1.18375320854817,1.20990716048664,0,0,1.05226393590145,0.518440956986236,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0.685946781900644,0.870592065804026,2.27144668714639,0.171986032471617,0,0.146178634172371,0.0821154570532092,0.872901148395775,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0.39961921916426,1.15272333723285,0.114536596165916,0,0.14405479798815,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0.0671834724867263,0,0,0.236349546921671,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0.275078873194468,0.83088067605837,0.2249738915515,0.77380195455795,0.0607495566580247,1.34173875039706,2.52178263357434,2.04572893726493,0.211200673038813,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0,0,0.342173675768659,0,0.640724475406168,0.943225830597996,1.24271716604159,0,0,0.243585196761792,1.91502377331055,0,0,0,0,0.628216385000937,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,2.37795163123056,0.622077260032973,0,0,0,0,0,0,0,0,0,0,4.00285374142735,0,0,0.385375350578757,0,0,0.205116364240755,0,0,0.161475645631851,0,2.15924980702256,2.83127336034577,0.550285795565037,0.462102664601353,0,0,0,0.225630985047772,0,0.781514011233092,3.66669372273991,0,2.21784129325568,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,2.74128883428591,0.496211178389294,0,0.638812138197976,0,0.336283722218824,1.21393120847326,3.41493287026946,4.61252324845722,0.115233987555779,0,0.203909198930495,0.0657727735628491,0.118193840883968,0.111231401892069,0.156986185701028,0.157115589916002,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,3.01159151174194,0,0,1.270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| ||
|short_description=p4@WDSUB1 | |short_description=p4@WDSUB1 | ||
}} | }} |
Latest revision as of 18:40, 17 September 2015
Short description: | p4@WDSUB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WDSUB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000409990, NM_001128213, uc002uak.3_5end |
EntrezGene: | WDSUB1 |
HGNC: | 26697 |
UniProt: | Q8N9V3D3DPA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.87e-07 | 42 |
germ line cell | 5.46e-07 | 7 |
germ cell | 5.46e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.08e-10 | 160 |
endoderm | 8.08e-10 | 160 |
presumptive endoderm | 8.08e-10 | 160 |
male genital duct | 7.66e-09 | 3 |
internal male genitalia | 7.66e-09 | 3 |
small intestine | 7.67e-09 | 4 |
gastrointestinal system | 8.47e-09 | 25 |
internal genitalia | 8.89e-08 | 25 |
placenta | 3.44e-07 | 4 |
allantois | 3.44e-07 | 4 |
major salivary gland | 3.60e-07 | 2 |
extraembryonic membrane | 7.51e-07 | 14 |
membranous layer | 7.51e-07 | 14 |
chorion | 8.60e-07 | 7 |
pituitary gland | 9.23e-07 | 2 |
intestine | 9.95e-07 | 17 |
duct of male reproductive system | 9.96e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.97e-10 | 106 |
cell type cancer | 1.45e-08 | 143 |
adenocarcinoma | 1.24e-07 | 25 |
squamous cell carcinoma | 5.37e-07 | 14 |