FFCP PHASE1:Hg19::chr2:58274001..58274016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7444 | |EntrezGene=7444 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12719 | |HGNC=12719 | ||
|TSSclassifier=strong | |||
|UniProt=E7ERS5 | |UniProt=E7ERS5 | ||
|association_with_transcript=0bp_to_ENST00000428021_5end | |association_with_transcript=0bp_to_ENST00000428021_5end | ||
|cluster_id=chr2:58274001..58274016,+ | |||
|description=CAGE_peak_3_at_VRK2_5end | |description=CAGE_peak_3_at_VRK2_5end | ||
|id=chr2:58274001..58274016,+ | |id=chr2:58274001..58274016,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.66e-12!254;CL:0000012!9.72e-10!682;CL:0000223!2.16e-09!59;CL:0000548!6.26e-09!679;CL:0000004!6.26e-09!679;CL:0000255!6.26e-09!679;CL:0000063!1.55e-08!578;CL:0002076!2.19e-08!43 | |ontology_enrichment_celltype=CL:0000066!4.66e-12!254;CL:0000012!9.72e-10!682;CL:0000223!2.16e-09!59;CL:0000548!6.26e-09!679;CL:0000004!6.26e-09!679;CL:0000255!6.26e-09!679;CL:0000063!1.55e-08!578;CL:0002076!2.19e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;4.00e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.68e-12,58;CL:0002076,2.73e-11,42;CL:0000066,5.35e-10,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.55e-25!235;DOID:14566!9.28e-24!239;DOID:305!1.50e-21!106;DOID:0050687!1.45e-20!143;DOID:0050686!5.74e-11!137;DOID:299!1.81e-07!25;DOID:2531!3.45e-07!51;DOID:0060083!3.45e-07!51 | |ontology_enrichment_disease=DOID:162!1.55e-25!235;DOID:14566!9.28e-24!239;DOID:305!1.50e-21!106;DOID:0050687!1.45e-20!143;DOID:0050686!5.74e-11!137;DOID:299!1.81e-07!25;DOID:2531!3.45e-07!51;DOID:0060083!3.45e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:299;7.18e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.91e-18,106;DOID:162,8.96e-18,235;DOID:14566,6.51e-17,239;DOID:0050687,2.61e-16,143;DOID:0050686,5.70e-09,137;DOID:299,3.37e-07,25 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@VRK2 | |short_description=p3@VRK2 | ||
}} | }} |
Latest revision as of 19:07, 17 September 2015
Short description: | p3@VRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VRK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428021_5end |
EntrezGene: | VRK2 |
HGNC: | 12719 |
UniProt: | E7ERS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.68e-12 | 58 |
endo-epithelial cell | 2.73e-11 | 42 |
epithelial cell | 5.35e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.91e-18 | 106 |
cancer | 8.96e-18 | 235 |
disease of cellular proliferation | 6.51e-17 | 239 |
cell type cancer | 2.61e-16 | 143 |
organ system cancer | 5.70e-09 | 137 |
adenocarcinoma | 3.37e-07 | 25 |