FFCP PHASE1:Hg19::chr12:21556577..21556599,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10956 | |||
|TSSclassifier=strong | |||
|UniProt=C9JUW6,C9JTF6 | |||
|association_with_transcript=0bp_to_ENST00000450590,ENST00000453443_5end | |||
|cluster_id=chr12:21556577..21556599,- | |||
|description=CAGE_peak_5_at_SLCO1A2_5end | |||
|id=chr12:21556577..21556599,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000222;1.48e-40;1!CL:0000322;1.31e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.22e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.70e-40;1!UBERON:0003056;1.31e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;3.44e-21;2!DOID:3908;2.63e-09;5!DOID:1325;5.23e-07;7!DOID:3904;5.23e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.11e-21,2;DOID:3908,2.53e-09,5;DOID:1325,5.08e-07,7;DOID:3904,5.08e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-23!115;UBERON:0001896!1.17e-16!3;UBERON:0005290!1.17e-16!3;UBERON:0010096!1.17e-16!3;UBERON:0000033!1.79e-12!123;UBERON:0003076!3.06e-12!15;UBERON:0003057!3.06e-12!15;UBERON:0001829!3.56e-12!2;UBERON:0003127!4.68e-12!2;UBERON:0003075!4.71e-12!86;UBERON:0007284!4.71e-12!86;UBERON:0005743!8.02e-12!86;UBERON:0000153!1.05e-11!129;UBERON:0007811!1.05e-11!129;UBERON:0002360!1.46e-11!2;UBERON:0000094!1.46e-11!2;UBERON:0007645!1.46e-11!2;UBERON:0002346!2.25e-11!90;UBERON:0004121!2.79e-11!169;UBERON:0000924!6.52e-11!173;UBERON:0006601!6.52e-11!173;UBERON:0004733!7.47e-11!12;UBERON:0002028!7.47e-11!12;UBERON:0007277!7.47e-11!12;UBERON:0001017!8.42e-11!82;UBERON:0001049!1.43e-10!57;UBERON:0005068!1.43e-10!57;UBERON:0006241!1.43e-10!57;UBERON:0007135!1.43e-10!57;UBERON:0000073!2.05e-10!94;UBERON:0001016!2.05e-10!94;UBERON:0004732!5.33e-10!13;UBERON:0001044!6.11e-09!6;UBERON:0003293!6.11e-09!6;UBERON:0003294!6.11e-09!6;UBERON:0010047!6.11e-09!6;UBERON:0000167!6.11e-09!6;UBERON:0000166!1.03e-08!21;UBERON:0002616!2.10e-08!59;UBERON:0000955!3.37e-08!69;UBERON:0006238!3.37e-08!69;UBERON:0000078!2.21e-07!18;UBERON:0001831!5.13e-07!1;UBERON:0001567!5.13e-07!1;UBERON:0008801!5.13e-07!1;UBERON:0001736!8.03e-07!1;UBERON:0006298!8.03e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.70e-40;1!UBERON:0001567;2.70e-40;1!UBERON:0004903;3.44e-21;2!UBERON:0002173;3.44e-21;2!UBERON:0002186;3.44e-21;2!UBERON:0001829;6.30e-21;2!UBERON:0004089;6.30e-21;2!UBERON:0004821;1.31e-14;3!UBERON:0007499;1.31e-14;3!UBERON:0003215;1.31e-14;3!UBERON:0010368;1.31e-14;3!UBERON:0009911;1.31e-14;3!UBERON:0002299;1.31e-14;3!UBERON:0006524;1.31e-14;3!UBERON:0008874;1.31e-14;3!UBERON:0002169;1.31e-14;3!UBERON:0004894;1.31e-14;3!UBERON:0002369;1.96e-14;3!UBERON:0001235;1.96e-14;3!UBERON:0006858;1.96e-14;3!UBERON:0009856;2.66e-11;4!UBERON:0000966;2.63e-09;5!UBERON:0005388;2.63e-09;5!UBERON:0001802;2.63e-09;5!UBERON:0001456;1.42e-08;21!UBERON:0001044;7.01e-08;6!UBERON:0003293;7.01e-08;6!UBERON:0003294;7.01e-08;6!UBERON:0010047;7.01e-08;6!UBERON:0003408;7.01e-08;6!UBERON:0000167;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,3.30e-40,1;UBERON:0001567,3.30e-40,1;UBERON:0008801,3.30e-40,1;UBERON:0004903,3.11e-21,2;UBERON:0002173,3.11e-21,2;UBERON:0002186,3.11e-21,2;UBERON:0001829,6.96e-21,2;UBERON:0004089,6.96e-21,2;UBERON:0004821,1.22e-14,3;UBERON:0003215,1.22e-14,3;UBERON:0010368,1.22e-14,3;UBERON:0009911,1.22e-14,3;UBERON:0002299,1.22e-14,3;UBERON:0006524,1.22e-14,3;UBERON:0008874,1.22e-14,3;UBERON:0002169,1.22e-14,3;UBERON:0004894,1.22e-14,3;UBERON:0002369,1.83e-14,3;UBERON:0001235,1.83e-14,3;UBERON:0006858,1.83e-14,3;UBERON:0001456,3.27e-08,22;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0001044,7.25e-08,6;UBERON:0003293,7.25e-08,6;UBERON:0003294,7.25e-08,6;UBERON:0010047,7.25e-08,6;UBERON:0000167,7.25e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69904730449319,0,5.68272293612826,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.665574309221114,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,1.64477330057155,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00335809236594,0,0.23248285073625,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0.134704106029175,0.932388670104793,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SLCO1A2 | |||
}} |
Latest revision as of 19:25, 17 September 2015
Short description: | p5@SLCO1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLCO1A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000450590, ENST00000453443_5end |
EntrezGene: | SLCO1A2 |
HGNC: | 10956 |
UniProt: | C9JUW6C9JTF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.30e-40 | 1 |
cheek | 3.30e-40 | 1 |
parotid gland primordium | 3.30e-40 | 1 |
bronchoalveolar duct junction | 3.11e-21 | 2 |
alveolar duct | 3.11e-21 | 2 |
bronchiole | 3.11e-21 | 2 |
major salivary gland | 6.96e-21 | 2 |
midface | 6.96e-21 | 2 |
pulmonary alveolus epithelium | 1.22e-14 | 3 |
alveolus | 1.22e-14 | 3 |
pulmonary lobule | 1.22e-14 | 3 |
lobule | 1.22e-14 | 3 |
alveolus of lung | 1.22e-14 | 3 |
alveolar system | 1.22e-14 | 3 |
pulmonary acinus | 1.22e-14 | 3 |
alveolar sac | 1.22e-14 | 3 |
alveolar wall | 1.22e-14 | 3 |
adrenal gland | 1.83e-14 | 3 |
adrenal cortex | 1.83e-14 | 3 |
adrenal/interrenal gland | 1.83e-14 | 3 |
face | 3.27e-08 | 22 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
saliva-secreting gland | 7.25e-08 | 6 |
gland of oral region | 7.25e-08 | 6 |
gland of foregut | 7.25e-08 | 6 |
oral gland | 7.25e-08 | 6 |
oral cavity | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.11e-21 | 2 |
non-small cell lung carcinoma | 2.53e-09 | 5 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |