FFCP PHASE1:Hg19::chr6:30899898..30899920,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389376 | |EntrezGene=389376 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18386 | |HGNC=18386 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000474914_5end | |association_with_transcript=-12bp_to_ENST00000474914_5end | ||
|cluster_id=chr6:30899898..30899920,- | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_2_at_SFTA2_5end | |description=CAGE_peak_2_at_SFTA2_5end | ||
|id=chr6:30899898..30899920,- | |id=chr6:30899898..30899920,- | ||
|ontology_enrichment_celltype=CL:1000449!2.71e-09!16;CL:1000507!8.68e-09!12;CL:1000494!8.68e-09!12;CL:0002681!2.32e-08!13;CL:0002584!2.32e-08!13;CL:1000497!3.44e-08!18;CL:0002518!3.44e-08!18;CL:0000239!6.18e-07!3;CL:1000615!6.18e-07!3;CL:0002306!6.18e-07!3 | |ontology_enrichment_celltype=CL:1000449!2.71e-09!16;CL:1000507!8.68e-09!12;CL:1000494!8.68e-09!12;CL:0002681!2.32e-08!13;CL:0002584!2.32e-08!13;CL:1000497!3.44e-08!18;CL:0002518!3.44e-08!18;CL:0000239!6.18e-07!3;CL:1000615!6.18e-07!3;CL:0002306!6.18e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000239;2.25e-12;3!CL:1000615;2.25e-12;3!CL:0002306;2.25e-12;3!CL:0000313;3.10e-10;1!CL:0002681;4.36e-07;12!CL:0002584;4.36e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.00e-12,3;CL:1000615,2.00e-12,3;CL:0002306,2.00e-12,3;CL:0000313,3.10e-10,1;CL:0002681,4.18e-07,12;CL:0002584,4.18e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009143;6.61e-10;1!UBERON:0006242;9.82e-10;1!UBERON:0001041;2.75e-07;30 | |||
|ontology_enrichment_disease=DOID:299!5.65e-10!25 | |ontology_enrichment_disease=DOID:299!5.65e-10!25 | ||
|ontology_enrichment_disease_v019=DOID:2152;3.10e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.10e-10,1 | |||
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| ||
|short_description=p2@SFTA2 | |short_description=p2@SFTA2 | ||
}} | }} |
Latest revision as of 19:29, 17 September 2015
Short description: | p2@SFTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SFTA2_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -12bp_to_ENST00000474914_5end |
EntrezGene: | SFTA2 |
HGNC: | 18386 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.00e-12 | 3 |
kidney cortex tubule cell | 2.00e-12 | 3 |
epithelial cell of proximal tubule | 2.00e-12 | 3 |
serous secreting cell | 3.10e-10 | 1 |
kidney cortical cell | 4.18e-07 | 12 |
renal cortical epithelial cell | 4.18e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.00e-12 | 3 |
region of nephron tubule | 2.00e-12 | 3 |
proximal tubule | 2.00e-12 | 3 |
lower lobe of right lung | 1.65e-10 | 1 |
right lung lobe | 1.65e-10 | 1 |
lower lobe of lung | 1.65e-10 | 1 |
lobe of lung | 1.65e-10 | 1 |
right lung | 1.65e-10 | 1 |
epithelium of female gonad | 3.10e-10 | 1 |
biliary system | 3.92e-09 | 9 |
biliary tree | 3.92e-09 | 9 |
biliary bud | 3.92e-09 | 9 |
thoracic cavity element | 6.84e-09 | 34 |
thoracic cavity | 6.84e-09 | 34 |
thoracic segment organ | 1.27e-08 | 35 |
endo-epithelium | 2.40e-07 | 82 |
trunk region element | 4.17e-07 | 101 |
cortex of kidney | 4.18e-07 | 12 |
renal parenchyma | 4.18e-07 | 12 |
subdivision of digestive tract | 4.67e-07 | 118 |
foregut | 7.95e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.10e-10 | 1 |