FFCP PHASE1:Hg19::chr6:30899962..30899981,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389376 | |EntrezGene=389376 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18386 | |HGNC=18386 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UW10 | |UniProt=Q6UW10 | ||
|association_with_transcript=-10bp_to_ENST00000359086,NM_205854,uc003nsf.2_5end | |association_with_transcript=-10bp_to_ENST00000359086,NM_205854,uc003nsf.2_5end | ||
|cluster_id=chr6:30899962..30899981,- | |||
|coexpression_cluster_id=C154 | |coexpression_cluster_id=C154 | ||
|description=CAGE_peak_3_at_SFTA2_5end | |description=CAGE_peak_3_at_SFTA2_5end | ||
|id=chr6:30899962..30899981,- | |id=chr6:30899962..30899981,- | ||
|ontology_enrichment_celltype=CL:0002681;2.31e-17;12!CL:0002584;2.31e-17;12!CL:1000449;7.21e-14;15!CL:1000507;1.38e-13;10!CL:1000494;1.38e-13;10!CL:0000239;2.09e-12;3!CL:1000615;2.09e-12;3!CL:0002306;2.09e-12;3!CL:1000497;3.20e-12;17!CL:0002518;3.20e-12;17!CL:0000313;4.66e-10;1!CL:0002537;1.30e-07;5 | |ontology_enrichment_celltype=CL:0000239!9.77e-11!3;CL:1000615!9.77e-11!3;CL:0002306!9.77e-11!3;CL:1000507!3.55e-09!12;CL:1000494!3.55e-09!12;CL:1000449!4.22e-09!16;CL:0002681!9.83e-09!13;CL:0002584!9.83e-09!13;CL:1000497!5.74e-08!18;CL:0002518!5.74e-08!18;CL:0000066!8.49e-08!254;CL:0002536!2.22e-07!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002681;2.31e-17;12!CL:0002584;2.31e-17;12!CL:1000449;7.21e-14;15!CL:1000507;1.38e-13;10!CL:1000494;1.38e-13;10!CL:0000239;2.09e-12;3!CL:1000615;2.09e-12;3!CL:0002306;2.09e-12;3!CL:1000497;3.20e-12;17!CL:0002518;3.20e-12;17!CL:0000313;4.66e-10;1!CL:0002537;1.30e-07;5 | ||
|ontology_enrichment_disease=DOID:2152;4.66e-10;1!DOID:299;2.39e-08;25 | |ontology_enrichment_celltype_v019_2=CL:0002681,2.24e-17,12;CL:0002584,2.24e-17,12;CL:1000449,7.02e-14,15;CL:1000507,1.36e-13,10;CL:1000494,1.36e-13,10;CL:0000239,2.15e-12,3;CL:1000615,2.15e-12,3;CL:0002306,2.15e-12,3;CL:1000497,3.13e-12,17;CL:0002518,3.13e-12,17;CL:0000313,4.46e-10,1;CL:0002537,1.15e-07,5 | ||
|ontology_enrichment_uberon=UBERON:0002394;1.38e-19;4!UBERON:0003928;1.38e-19;4!UBERON:0002294;1.72e-19;7!UBERON:0001173;1.72e-19;7!UBERON:0001225;2.31e-17;12!UBERON:0008987;2.31e-17;12!UBERON:0001851;7.21e-14;15!UBERON:0006555;7.21e-14;15!UBERON:0000353;7.21e-14;15!UBERON:0004819;7.21e-14;15!UBERON:0001285;7.21e-14;15!UBERON:0007684;7.21e-14;15!UBERON:0004211;1.38e-13;10!UBERON:0009773;1.38e-13;10!UBERON:0001231;1.38e-13;10!UBERON:0004810;1.38e-13;10!UBERON:0006853;2.09e-12;3!UBERON:0007685;2.09e-12;3!UBERON:0004134;2.09e-12;3!UBERON:0002114;8.21e-12;2!UBERON:0004911;4.66e-10;1!UBERON:0002171;9.29e-10;1!UBERON:0006518;9.29e-10;1!UBERON:0008949;9.29e-10;1!UBERON:0000101;9.29e-10;1!UBERON:0002167;9.29e-10;1!UBERON:0005795;1.76e-09;1!UBERON:0004913;1.76e-09;1!UBERON:0003703;1.76e-09;1!UBERON:0001174;1.76e-09;1!UBERON:0004914;1.76e-09;1!UBERON:0002113;1.31e-08;24!UBERON:0011143;1.31e-08;24!UBERON:0000058;3.73e-08;10!UBERON:0002108;1.96e-07;4!UBERON:0000489;4.33e-07;29!UBERON:0006554;7.59e-07;30!UBERON:0001008;7.59e-07;30 | |ontology_enrichment_development_v019=UBERON:0006242;9.29e-10;1!UBERON:0009143;1.76e-09;1 | ||
|ontology_enrichment_disease=DOID:299!3.96e-13!25;DOID:3493!8.92e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;4.66e-10;1!DOID:299;2.39e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.46e-10,1;DOID:299,2.45e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.62e-13!14;UBERON:0000158!3.62e-13!14;UBERON:0000058!5.55e-13!26;UBERON:0002294!5.72e-12!7;UBERON:0001173!5.72e-12!7;UBERON:0004912!5.72e-12!7;UBERON:0000305!1.82e-11!7;UBERON:0006853!9.77e-11!3;UBERON:0007685!9.77e-11!3;UBERON:0004134!9.77e-11!3;UBERON:0004871!5.52e-10!8;UBERON:0004119!1.22e-09!169;UBERON:0000925!1.22e-09!169;UBERON:0006595!1.22e-09!169;UBERON:0009773!3.55e-09!12;UBERON:0001231!3.55e-09!12;UBERON:0004810!3.55e-09!12;UBERON:0004876!3.97e-09!20;UBERON:0004211!4.22e-09!16;UBERON:0001285!4.22e-09!16;UBERON:0007684!4.22e-09!16;UBERON:0003220!4.22e-09!16;UBERON:0004208!4.22e-09!16;UBERON:0006554!5.62e-09!44;UBERON:0001225!9.83e-09!13;UBERON:0008987!9.83e-09!13;UBERON:0001008!1.03e-08!45;UBERON:0006555!1.68e-08!17;UBERON:0005103!1.68e-08!17;UBERON:0000083!1.68e-08!17;UBERON:0009201!1.68e-08!17;UBERON:0004819!1.68e-08!17;UBERON:0006553!1.68e-08!17;UBERON:0003074!1.68e-08!17;UBERON:0003060!1.68e-08!17;UBERON:0002394!2.76e-08!4;UBERON:0003928!2.76e-08!4;UBERON:0003064!5.39e-08!37;UBERON:0000080!5.74e-08!18;UBERON:0002120!5.74e-08!18;UBERON:0004875!5.74e-08!18;UBERON:0005721!5.74e-08!18;UBERON:0005754!5.74e-08!18;UBERON:0007297!5.74e-08!18;UBERON:0002113!6.38e-08!27;UBERON:0003918!6.38e-08!27;UBERON:0005095!6.38e-08!27;UBERON:0007687!6.38e-08!27;UBERON:0000077!1.12e-07!130;UBERON:0001987!2.45e-07!4;UBERON:0004340!2.45e-07!4;UBERON:0000478!4.19e-07!24;UBERON:0001851!5.99e-07!16;UBERON:0005156!7.50e-07!59;UBERON:0000990!7.50e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.38e-19;4!UBERON:0003928;1.38e-19;4!UBERON:0002294;1.72e-19;7!UBERON:0001173;1.72e-19;7!UBERON:0001225;2.31e-17;12!UBERON:0008987;2.31e-17;12!UBERON:0001851;7.21e-14;15!UBERON:0006555;7.21e-14;15!UBERON:0000353;7.21e-14;15!UBERON:0004819;7.21e-14;15!UBERON:0001285;7.21e-14;15!UBERON:0007684;7.21e-14;15!UBERON:0004211;1.38e-13;10!UBERON:0009773;1.38e-13;10!UBERON:0001231;1.38e-13;10!UBERON:0004810;1.38e-13;10!UBERON:0006853;2.09e-12;3!UBERON:0007685;2.09e-12;3!UBERON:0004134;2.09e-12;3!UBERON:0002114;8.21e-12;2!UBERON:0004911;4.66e-10;1!UBERON:0002171;9.29e-10;1!UBERON:0006518;9.29e-10;1!UBERON:0008949;9.29e-10;1!UBERON:0000101;9.29e-10;1!UBERON:0002167;9.29e-10;1!UBERON:0005795;1.76e-09;1!UBERON:0004913;1.76e-09;1!UBERON:0003703;1.76e-09;1!UBERON:0001174;1.76e-09;1!UBERON:0004914;1.76e-09;1!UBERON:0002113;1.31e-08;24!UBERON:0011143;1.31e-08;24!UBERON:0000058;3.73e-08;10!UBERON:0002108;1.96e-07;4!UBERON:0000489;4.33e-07;29!UBERON:0006554;7.59e-07;30!UBERON:0001008;7.59e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,2.24e-17,12;UBERON:0008987,2.24e-17,12;UBERON:0002294,3.70e-15,9;UBERON:0001173,3.70e-15,9;UBERON:0004912,3.70e-15,9;UBERON:0001851,7.02e-14,15;UBERON:0004211,7.02e-14,15;UBERON:0009773,7.02e-14,15;UBERON:0000353,7.02e-14,15;UBERON:0001231,7.02e-14,15;UBERON:0001285,7.02e-14,15;UBERON:0007684,7.02e-14,15;UBERON:0004208,7.02e-14,15;UBERON:0004810,1.36e-13,10;UBERON:0002394,3.65e-13,6;UBERON:0003928,3.65e-13,6;UBERON:0006555,5.27e-13,16;UBERON:0004819,5.27e-13,16;UBERON:0006853,2.15e-12,3;UBERON:0007685,2.15e-12,3;UBERON:0004134,2.15e-12,3;UBERON:0002114,1.35e-11,2;UBERON:0004911,4.46e-10,1;UBERON:0002171,1.06e-09,1;UBERON:0006518,1.06e-09,1;UBERON:0008949,1.06e-09,1;UBERON:0000101,1.06e-09,1;UBERON:0002167,1.06e-09,1;UBERON:0004913,2.67e-09,1;UBERON:0003703,2.67e-09,1;UBERON:0001174,2.67e-09,1;UBERON:0004914,2.67e-09,1;UBERON:0005177,4.02e-08,101;UBERON:0002113,6.16e-08,26;UBERON:0003918,6.16e-08,26;UBERON:0011143,6.16e-08,26;UBERON:0005095,6.16e-08,26;UBERON:0007687,6.16e-08,26;UBERON:0002108,2.62e-07,4;UBERON:0000058,2.72e-07,19;UBERON:0009569,3.77e-07,112 | |||
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| ||
|short_description=p3@SFTA2 | |short_description=p3@SFTA2 | ||
}} | }} |
Latest revision as of 19:31, 17 September 2015
Short description: | p3@SFTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SFTA2_5end |
Coexpression cluster: | C154_adenocarcinoma_Mesenchymal_Cardiac_small_sacrococcigeal_Smooth_Prostate |
Association with transcript: | -10bp_to_ENST00000359086, NM_205854, uc003nsf.2_5end |
EntrezGene: | SFTA2 |
HGNC: | 18386 |
UniProt: | Q6UW10 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cortical cell | 2.24e-17 | 12 |
renal cortical epithelial cell | 2.24e-17 | 12 |
epithelial cell of nephron | 7.02e-14 | 15 |
kidney tubule cell | 1.36e-13 | 10 |
nephron tubule epithelial cell | 1.36e-13 | 10 |
brush border epithelial cell | 2.15e-12 | 3 |
kidney cortex tubule cell | 2.15e-12 | 3 |
epithelial cell of proximal tubule | 2.15e-12 | 3 |
kidney cell | 3.13e-12 | 17 |
kidney epithelial cell | 3.13e-12 | 17 |
serous secreting cell | 4.46e-10 | 1 |
amnion mesenchymal stem cell | 1.15e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.46e-10 | 1 |
adenocarcinoma | 2.45e-08 | 25 |