FFCP PHASE1:Hg19::chr10:28287780..28287802,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:28287780..28287802,- to FFCP PHASE1:Hg19::chr10:28287780..28287802,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55130 | |EntrezGene=55130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25583 | |HGNC=25583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009xky.2_5end | |||
|cluster_id=chr10:28287780..28287802,- | |||
|description=CAGE_peak_3_at_ARMC4_5end | |||
|id=chr10:28287780..28287802,- | |||
|ontology_enrichment_celltype=CL:0002620!2.61e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.38e-11;23!CL:0000222;3.56e-07;1!CL:0002032;8.47e-07;1!CL:0002574;8.47e-07;1!CL:0000557;8.47e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.08e-11,23;CL:0002574,8.02e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;7.86e-13;2!DOID:0060085;8.47e-07;1!DOID:3165;8.47e-07;1!DOID:0060121;8.47e-07;1!DOID:2438;8.47e-07;1!DOID:4418;8.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,7.89e-13,2;DOID:0060085,5.69e-07,1;DOID:3165,5.69e-07,1;DOID:0060121,5.69e-07,1;DOID:2438,5.69e-07,1;DOID:4418,5.69e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.12e-12;2!UBERON:0001282;8.47e-07;1!UBERON:0009842;8.47e-07;1!UBERON:0003704;8.47e-07;1!UBERON:0001171;8.47e-07;1!UBERON:0001172;8.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.70e-12,2;UBERON:0002097,1.17e-07,41;UBERON:0001282,6.38e-07,1;UBERON:0009842,6.38e-07,1;UBERON:0003704,6.38e-07,1;UBERON:0001171,6.38e-07,1;UBERON:0001172,6.38e-07,1 | |||
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| ||
|short_description=p3@ARMC4 | |||
}} | }} |
Latest revision as of 19:35, 17 September 2015
Short description: | p3@ARMC4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARMC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc009xky.2_5end |
EntrezGene: | ARMC4 |
HGNC: | 25583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.08e-11 | 23 |
stromal cell of pancreas | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.70e-12 | 2 |
skin of body | 1.17e-07 | 41 |
intralobular bile duct | 6.38e-07 | 1 |
acinus | 6.38e-07 | 1 |
intrahepatic bile duct | 6.38e-07 | 1 |
portal lobule | 6.38e-07 | 1 |
hepatic acinus | 6.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.89e-13 | 2 |
organ system benign neoplasm | 5.69e-07 | 1 |
skin benign neoplasm | 5.69e-07 | 1 |
integumentary system benign neoplasm | 5.69e-07 | 1 |
dermis tumor | 5.69e-07 | 1 |
cutaneous fibrous histiocytoma | 5.69e-07 | 1 |