FFCP PHASE1:Hg19::chr10:28287942..28287952,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55130 | |EntrezGene=55130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25583 | |HGNC=25583 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T2S8,A8K906 | |UniProt=Q5T2S8,A8K906 | ||
|association_with_transcript=24bp_to_ENST00000305242,NM_018076,uc001itz.2_5end | |association_with_transcript=24bp_to_ENST00000305242,NM_018076,uc001itz.2_5end | ||
|cluster_id=chr10:28287942..28287952,- | |||
|coexpression_cluster_id=C199 | |coexpression_cluster_id=C199 | ||
|description=CAGE_peak_8_at_ARMC4_5end | |description=CAGE_peak_8_at_ARMC4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000047!2.25e-08!8;CL:0002319!2.31e-08!25 | |ontology_enrichment_celltype=CL:0000047!2.25e-08!8;CL:0002319!2.31e-08!25 | ||
|ontology_enrichment_celltype_v019=CL:0000047;8.10e-26;2!CL:0002319;2.15e-17;25!CL:0000243;9.17e-13;15!CL:0000125;9.17e-13;15!CL:0000095;1.55e-11;17!CL:0002552;3.42e-11;5 | |ontology_enrichment_celltype_v019=CL:0000047;8.10e-26;2!CL:0002319;2.15e-17;25!CL:0000243;9.17e-13;15!CL:0000125;9.17e-13;15!CL:0000095;1.55e-11;17!CL:0002552;3.42e-11;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.09e-17,25;CL:0000243,9.17e-13,15;CL:0000125,9.17e-13,15;CL:0000030,9.17e-13,15;CL:0000339,9.17e-13,15;CL:0000095,1.55e-11,17;CL:0000123,1.55e-11,17;CL:0002552,3.60e-11,5;CL:0000133,3.25e-08,59;CL:0000047,1.69e-07,8;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006238;4.28e-19;10!CL:0000339;9.17e-13;15 | |ontology_enrichment_development_v019=UBERON:0006238;4.28e-19;10!CL:0000339;9.17e-13;15 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3093;1.33e-17;11 | |ontology_enrichment_disease_v019=DOID:3093;1.33e-17;11 | ||
|ontology_enrichment_disease_v019_2=DOID:3093,1.33e-17,11 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001828;1.75e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0001828;1.75e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,1.80e-07,8 | |||
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| ||
|short_description=p8@ARMC4 | |short_description=p8@ARMC4 | ||
}} | }} |
Latest revision as of 19:37, 17 September 2015
Short description: | p8@ARMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARMC4_5end |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | 24bp_to_ENST00000305242, NM_018076, uc001itz.2_5end |
EntrezGene: | ARMC4 |
HGNC: | 25583 |
UniProt: | Q5T2S8A8K906 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.09e-17 | 25 |
glial cell (sensu Vertebrata) | 9.17e-13 | 15 |
glial cell | 9.17e-13 | 15 |
glioblast | 9.17e-13 | 15 |
glioblast (sensu Vertebrata) | 9.17e-13 | 15 |
neuron associated cell | 1.55e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.55e-11 | 17 |
fibroblast of gingiva | 3.60e-11 | 5 |
neurectodermal cell | 3.25e-08 | 59 |
neuronal stem cell | 1.69e-07 | 8 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
gingiva | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.33e-17 | 11 |