FFCP PHASE1:Hg19::chr15:45803320..45803343,+: Difference between revisions
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|id=chr15:45803320..45803343,+
|short_description=p1@HMGN2P46
|description=CAGE_peak_1_at_HMGN2P46_5end
|association_with_transcript=0bp_to_ENST00000409454,NR_02201...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283651 | |EntrezGene=283651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=26817 | |HGNC=26817 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SG4 | |UniProt=Q86SG4 | ||
|association_with_transcript=0bp_to_ENST00000409454,NR_022014,uc001zvk.2,uc001zvm.1,uc001zvn.1,uc010beg.1,uc010beh.1,uc010bei.1,uc010bej.1_5end | |||
|cluster_id=chr15:45803320..45803343,+ | |||
|coexpression_cluster_id=C245 | |||
|description=CAGE_peak_1_at_HMGN2P46_5end | |||
|id=chr15:45803320..45803343,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.55e-98;1!UBERON:0009847;4.27e-34;3!UBERON:0003353;4.27e-34;3!UBERON:0006603;3.53e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!1.82e-13!1;UBERON:0008811!1.82e-13!1;UBERON:0006258!1.82e-13!1;UBERON:0005876!1.82e-13!1;UBERON:0004874!1.82e-13!1;UBERON:0001000!2.95e-13!1;UBERON:0005352!2.95e-13!1;UBERON:0002022!9.73e-13!1;UBERON:0003135!2.43e-10!11;UBERON:0003101!5.97e-09!22;UBERON:0000079!5.97e-09!22;UBERON:0007023!3.23e-07!115;UBERON:0001255!4.17e-07!2;UBERON:0001556!4.17e-07!2;UBERON:0005156!7.03e-07!59;UBERON:0000990!7.03e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;2.55e-98;1!UBERON:0008811;2.55e-98;1!UBERON:0003101;3.41e-19;22!UBERON:0000079;3.41e-19;22!UBERON:0002367;2.16e-10;11!UBERON:0010147;2.16e-10;11!UBERON:0003135;2.37e-10;11!UBERON:0003937;1.22e-09;12!UBERON:0005399;1.22e-09;12!UBERON:0005156;1.92e-07;59!UBERON:0000990;1.92e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.55e-98,1;UBERON:0008811,2.55e-98,1;UBERON:0006258,2.55e-98,1;UBERON:0005876,2.55e-98,1;UBERON:0004874,2.55e-98,1;UBERON:0003101,3.41e-19,22;UBERON:0000079,3.41e-19,22;UBERON:0003064,2.22e-15,28;UBERON:0002367,2.16e-10,11;UBERON:0010147,2.16e-10,11;UBERON:0009846,2.16e-10,11;UBERON:0003353,2.16e-10,11;UBERON:0004902,2.16e-10,11;UBERON:0003820,2.16e-10,11;UBERON:0009847,2.16e-10,11;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0003937,1.22e-09,12;UBERON:0005399,1.22e-09,12;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59 | |||
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|short_description=p1@HMGN2P46 | |||
}} | }} |
Latest revision as of 20:32, 17 September 2015
Short description: | p1@HMGN2P46 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HMGN2P46_5end |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | 0bp_to_ENST00000409454, NR_022014, uc001zvk.2, uc001zvm.1, uc001zvn.1, uc010beg.1, uc010beh.1, uc010bei.1, uc010bej.1_5end |
EntrezGene: | HMGN2P46 |
HGNC: | 26817 |
UniProt: | Q86SG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
penis | 2.55e-98 | 1 |
intromittent organ | 2.55e-98 | 1 |
lateral plate mesenchyme | 2.55e-98 | 1 |
undifferentiated genital tubercle | 2.55e-98 | 1 |
somatopleure | 2.55e-98 | 1 |
male organism | 3.41e-19 | 22 |
male reproductive system | 3.41e-19 | 22 |
intermediate mesoderm | 2.22e-15 | 28 |
prostate gland | 2.16e-10 | 11 |
male accessory sex gland | 2.16e-10 | 11 |
embryonic cloacal epithelium | 2.16e-10 | 11 |
epithelium of hindgut | 2.16e-10 | 11 |
urogenital sinus epithelium | 2.16e-10 | 11 |
prostate bud | 2.16e-10 | 11 |
prostate field | 2.16e-10 | 11 |
male reproductive organ | 2.37e-10 | 11 |
urogenital ridge | 2.37e-10 | 11 |
sex gland | 1.22e-09 | 12 |
male reproductive gland | 1.22e-09 | 12 |
cloaca | 1.86e-08 | 14 |
anal region | 1.86e-08 | 14 |
embryonic cloaca | 1.86e-08 | 14 |
terminal part of digestive tract | 1.86e-08 | 14 |
primitive urogenital sinus | 1.86e-08 | 14 |
proctodeum | 1.86e-08 | 14 |
genitourinary system | 5.55e-08 | 15 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |