FFCP PHASE1:Hg19::chr1:38158178..38158237,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55143 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14629 | |||
|TSSclassifier=strong | |||
|UniProt=Q53HL2 | |||
|association_with_transcript=19bp_to_NM_018101,uc001cbr.2,uc001cbs.2_5end | |||
|cluster_id=chr1:38158178..38158237,+ | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_CDCA8_5end | |||
|id=chr1:38158178..38158237,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.66e-20!679;CL:0000004!3.66e-20!679;CL:0000255!3.66e-20!679;CL:0000012!1.12e-19!682;CL:0000066!6.01e-18!254;CL:0000003!1.82e-11!722;CL:0002321!1.21e-10!248;CL:0000220!3.44e-10!246;CL:0000055!1.16e-09!180;CL:0000063!1.45e-09!578;CL:0000144!4.97e-09!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.24e-19,253;CL:0002321,6.19e-11,250;CL:0000333,8.27e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.39e-38!235;DOID:14566!3.95e-38!239;DOID:0050686!3.89e-21!137;DOID:2531!2.71e-19!51;DOID:0060083!2.71e-19!51;DOID:0050687!2.07e-16!143;DOID:1240!4.09e-15!39;DOID:305!1.25e-12!106;DOID:8692!4.31e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.92e-12;51!DOID:0060083;2.92e-12;51!DOID:1240;4.44e-12;39!DOID:8692;5.33e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.06e-39,235;DOID:14566,1.17e-38,239;DOID:0050686,2.19e-21,137;DOID:2531,1.37e-19,51;DOID:0060083,1.37e-19,51;DOID:0050687,1.65e-16,143;DOID:1240,2.43e-15,39;DOID:305,8.19e-13,106;DOID:8692,2.99e-11,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,4.28201047781966,0.140954404095971,0,0,0.872338524100369,5.06599756336621,1.26343974685366,0.261185628199839,37.3515583482293,64.1977074534633,55.0472257768034,25.58539688816,3.83675694176145,2.31978163009541,2.01697543935533,2.41077811209591,2.19093027116212,2.92759679274304,62.9148606772386,65.280221198161,22.8821946679004,39.7868022112169,58.7191283562673,40.1736446703369,43.3264010590884,46.6331348075692,48.4071305079127,0.786728553697808,0.767658796194425,0.77408061658038,21.1466881630153,33.1326510656075,5.9160641626686,92.9606406963619,42.6507697462265,10.8632162553893,0,0.401088894940283,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0.182664153764634,1.75996244461323,1.09227722252426,0.889509253863555,1.70692089026603,0,0.574752439954483,0.661044872784862,0.954053754535364,0,1.17447437874188,1.14681968437569,0,0.560508562981536,17.3833495951551,0.983548850569165,1.17903228824749,1.85041349099558,3.34372990781356,0.32592226663359,0,0,18.8283672135943,0.589211814949674,0.221533894583621,0.812411591295047,22.8002549111702,21.0696143047003,28.6121954010396,33.4383521520877,36.2253857168816,0,0.267540828089713,0,34.6726588654553,0.383220493601921,0.34362744548263,0.506039384039006,0.95569624297229,0.651083453856419,0,0.903450714466637,0.511946444617674,1.24930726552346,0.473554504088034,0,0.403213486449465,0.534880391567015,0.434473211648397,0,12.0726154746655,12.1469433751354,74.8179045436052,3.50936537445123,6.95263291011954,19.0868627292264,2.43317435151318,25.4298658171343,15.5210578223795,16.2494353532283,8.38266083185361,30.236508928281,34.8537376217364,0,0.174129737299267,0.531831842075461,0.238490624305342,0,0,28.0254994387054,22.3660994727592,33.6726286559366,22.6123176769604,23.0724689915448,24.2103876907259,36.7831141104787,4.13466814670926,3.5576626268671,4.35136796594071,22.1556124410031,14.4451700086517,9.76248230192678,25.3687525438649,17.012980905517,30.0940084317349,27.8416422056451,40.7653559349626,38.3291593664708,30.3765011061801,22.1674110155793,1.31780417436063,0,18.752044242129,0.993943903390637,13.2962037247809,0.264818361626438,37.2887606973458,34.4028330732406,14.0169400035577,17.0798393167528,5.42668606517752,9.02512002659322,12.1239604862719,26.3173664012669,10.5950199351452,2.88087962239999,73.8112510276459,7.49184184392769,35.9397247573003,6.72519062483105,50.2619654195314,59.083624694368,57.8657323613264,11.0243252477642,43.9746855976129,6.30287265172169,3.56400857184616,6.42894016124248,43.6877453730253,20.1213079708547,48.4808008187711,54.5516746641764,16.9009110445352,27.6555901154928,16.8568287689461,9.91571188783539,29.9460963542456,75.7024262606998,2.34913127700424,5.93409323246773,64.2194945620621,20.7135583769262,17.2619161830572,6.14185625894246,46.919820363072,30.3029086051328,38.1174999108613,3.58994604704967,4.36444353410792,42.6011511019937,43.5249064343406,53.7507077624246,4.05847791642923,7.63689137654337,7.1701148847251,40.3732967288961,40.2890495697315,43.921310404678,38.2509293006717,43.6515072014837,31.0230755214455,12.5159625863853,11.5783368874719,49.728571686893,0,1.44375896333917,35.0188128117938,39.9545715485101,41.6949081698424,28.4558449649576,34.6428316106926,41.2850877253308,25.7527798585914,28.0596695129245,27.7017953001401,39.860394549731,43.4749498790682,15.2282384192618,13.2307840246988,0,2.94848165003288,0,61.8048339180511,12.2988438543114,14.7548316856732,6.14601598288303,3.37205259772859,21.7142580409123,9.72178674164561,66.1390859779959,73.8353697548501,12.9898207822746,16.6939783164111,3.28744343860301,12.2711480596913,19.4453915282177,11.6055032863105,50.5730814693936,60.0940313466411,2.46217006087397,3.51006397708857,7.8774516013026,6.56136837907439,3.19166043577833,10.7749073904214,42.1820641930415,38.363679883843,49.8397482914775,1.97065295158377,10.3897152135607,0.829312462163088,0.144119953416961,0.25248486685276,17.652414613223,17.1894791501225,17.582617081507,17.1072446022705,10.3855767630357,27.3312182637965,3.14409075893636,55.7291489196443,37.4925659196621,43.9296332067491,0.129271715757778,7.15312891703765,30.430899092016,2.39344304926383,14.5610411675913,92.8518621086333,89.3649531746653,84.4558307481035,6.43400971461664,1.08524321078289,61.7430252585577,36.1567164566046,5.68627117988073,41.9734492654717,0.301439377059586,0,4.1988656296464,0,0.502257091432126,2.10833939483032,8.86611965318856,2.29723871668228,45.6438096130299,14.7676932800931,11.7121503853719,23.8151081109061,78.011260219495,0.591092280605782,0.431255149719035,0.513372145118994,17.2784344471275,5.20559415430487,21.6520867577755,9.21339459338918,14.0346525363696,0,0,0.828831026872071,0.49076596687656,0.500170521059677,2.44138521329762,2.9115920614313,10.7057393278297,6.30809660135739,9.83987885938791,0.30094609972771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| |||
|short_description=p1@CDCA8 | |||
}} |
Latest revision as of 22:10, 17 September 2015
Short description: | p1@CDCA8 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDCA8_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 19bp_to_NM_018101, uc001cbr.2, uc001cbs.2_5end |
EntrezGene: | CDCA8 |
HGNC: | 14629 |
UniProt: | Q53HL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.24e-19 | 253 |
embryonic cell | 6.19e-11 | 250 |
migratory neural crest cell | 8.27e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.06e-39 | 235 |
disease of cellular proliferation | 1.17e-38 | 239 |
organ system cancer | 2.19e-21 | 137 |
hematologic cancer | 1.37e-19 | 51 |
immune system cancer | 1.37e-19 | 51 |
cell type cancer | 1.65e-16 | 143 |
leukemia | 2.43e-15 | 39 |
carcinoma | 8.19e-13 | 106 |
myeloid leukemia | 2.99e-11 | 31 |