FFCP PHASE1:Hg19::chr1:38158178..38158237,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:38158178..38158237,+ to FFCP PHASE1:Hg19::chr1:38158178..38158237,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55143 | |EntrezGene=55143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14629 | |HGNC=14629 | ||
|TSSclassifier=strong | |||
|UniProt=Q53HL2 | |UniProt=Q53HL2 | ||
|association_with_transcript=19bp_to_NM_018101,uc001cbr.2,uc001cbs.2_5end | |||
|cluster_id=chr1:38158178..38158237,+ | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_CDCA8_5end | |||
|id=chr1:38158178..38158237,+ | |||
|ontology_enrichment_celltype=CL:0000548!3.66e-20!679;CL:0000004!3.66e-20!679;CL:0000255!3.66e-20!679;CL:0000012!1.12e-19!682;CL:0000066!6.01e-18!254;CL:0000003!1.82e-11!722;CL:0002321!1.21e-10!248;CL:0000220!3.44e-10!246;CL:0000055!1.16e-09!180;CL:0000063!1.45e-09!578;CL:0000144!4.97e-09!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.24e-19,253;CL:0002321,6.19e-11,250;CL:0000333,8.27e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.39e-38!235;DOID:14566!3.95e-38!239;DOID:0050686!3.89e-21!137;DOID:2531!2.71e-19!51;DOID:0060083!2.71e-19!51;DOID:0050687!2.07e-16!143;DOID:1240!4.09e-15!39;DOID:305!1.25e-12!106;DOID:8692!4.31e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;2.92e-12;51!DOID:0060083;2.92e-12;51!DOID:1240;4.44e-12;39!DOID:8692;5.33e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.06e-39,235;DOID:14566,1.17e-38,239;DOID:0050686,2.19e-21,137;DOID:2531,1.37e-19,51;DOID:0060083,1.37e-19,51;DOID:0050687,1.65e-16,143;DOID:1240,2.43e-15,39;DOID:305,8.19e-13,106;DOID:8692,2.99e-11,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CDCA8 | |||
}} | }} |
Latest revision as of 22:10, 17 September 2015
Short description: | p1@CDCA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDCA8_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 19bp_to_NM_018101, uc001cbr.2, uc001cbs.2_5end |
EntrezGene: | CDCA8 |
HGNC: | 14629 |
UniProt: | Q53HL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.24e-19 | 253 |
embryonic cell | 6.19e-11 | 250 |
migratory neural crest cell | 8.27e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.06e-39 | 235 |
disease of cellular proliferation | 1.17e-38 | 239 |
organ system cancer | 2.19e-21 | 137 |
hematologic cancer | 1.37e-19 | 51 |
immune system cancer | 1.37e-19 | 51 |
cell type cancer | 1.65e-16 | 143 |
leukemia | 2.43e-15 | 39 |
carcinoma | 8.19e-13 | 106 |
myeloid leukemia | 2.99e-11 | 31 |