FFCP PHASE1:Hg19::chr1:38218622..38218632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284656 | |EntrezGene=284656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19987 | |HGNC=19987 | ||
|TSSclassifier=strong | |||
|UniProt=F5GWI2 | |UniProt=F5GWI2 | ||
|association_with_transcript=-44bp_to_ENST00000437645,ENST00000540011_5end | |association_with_transcript=-44bp_to_ENST00000437645,ENST00000540011_5end | ||
|cluster_id=chr1:38218622..38218632,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_EPHA10_5end | |description=CAGE_peak_6_at_EPHA10_5end | ||
|id=chr1:38218622..38218632,- | |id=chr1:38218622..38218632,- | ||
|ontology_enrichment_celltype=CL:0000167!6.80e-08!1;CL:0000164!6.80e-08!1;CL:0000502!6.80e-08!1;CL:0000172!6.80e-08!1;CL:0000173!6.80e-08!1;CL:0002351!6.80e-08!1 | |ontology_enrichment_celltype=CL:0000167!6.80e-08!1;CL:0000164!6.80e-08!1;CL:0000502!6.80e-08!1;CL:0000172!6.80e-08!1;CL:0000173!6.80e-08!1;CL:0002351!6.80e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease=DOID:4430!6.80e-08!1;DOID:178!1.30e-07!1;DOID:326!1.30e-07!1;DOID:3978!1.30e-07!1;DOID:3394!1.30e-07!1;DOID:5844!1.30e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!2.91e-43!22;UBERON:0001950!1.34e-40!20;UBERON:0001869!1.63e-39!32;UBERON:0000956!5.53e-38!25;UBERON:0000203!5.53e-38!25;UBERON:0002020!2.57e-37!34;UBERON:0003528!2.57e-37!34;UBERON:0001893!4.38e-37!34;UBERON:0001049!7.58e-35!57;UBERON:0005068!7.58e-35!57;UBERON:0006241!7.58e-35!57;UBERON:0007135!7.58e-35!57;UBERON:0000955!2.36e-34!69;UBERON:0006238!2.36e-34!69;UBERON:0002616!1.48e-33!59;UBERON:0002791!2.72e-33!33;UBERON:0001017!1.96e-31!82;UBERON:0002780!2.11e-30!41;UBERON:0001890!2.11e-30!41;UBERON:0006240!2.11e-30!41;UBERON:0005743!8.33e-30!86;UBERON:0003080!1.26e-29!42;UBERON:0003075!2.69e-27!86;UBERON:0007284!2.69e-27!86;UBERON:0000073!1.24e-26!94;UBERON:0001016!1.24e-26!94;UBERON:0007023!1.32e-26!115;UBERON:0002346!6.54e-26!90;UBERON:0003056!1.82e-22!61;UBERON:0001871!1.19e-19!7;UBERON:0000033!1.11e-17!123;UBERON:0000153!1.12e-16!129;UBERON:0007811!1.12e-16!129;UBERON:0001876!4.54e-14!2;UBERON:0004121!4.34e-13!169;UBERON:0000924!1.08e-12!173;UBERON:0006601!1.08e-12!173;UBERON:0002298!1.35e-12!8;UBERON:0000349!4.66e-12!5;UBERON:0001872!6.54e-12!5;UBERON:0000025!8.23e-10!194;UBERON:0000200!1.23e-09!6;UBERON:0000988!1.53e-09!3;UBERON:0001896!6.84e-09!3;UBERON:0005290!6.84e-09!3;UBERON:0010096!6.84e-09!3;UBERON:0004733!1.92e-08!12;UBERON:0002028!1.92e-08!12;UBERON:0007277!1.92e-08!12;UBERON:0002902!8.28e-08!1;UBERON:0009899!8.28e-08!1;UBERON:0004732!8.42e-08!13;UBERON:0001301!1.80e-07!1;UBERON:0007190!2.31e-07!1;UBERON:0002581!2.47e-07!1;UBERON:0000064!2.96e-07!219;UBERON:0002022!3.17e-07!1;UBERON:0004111!4.29e-07!241;UBERON:0002420!4.36e-07!9;UBERON:0007245!4.36e-07!9;UBERON:0010009!4.36e-07!9;UBERON:0010011!4.36e-07!9;UBERON:0000454!4.36e-07!9;UBERON:0003076!8.99e-07!15;UBERON:0003057!8.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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|short_description=p6@EPHA10 | |short_description=p6@EPHA10 | ||
}} | }} |
Latest revision as of 22:17, 17 September 2015
Short description: | p6@EPHA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EPHA10_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -44bp_to_ENST00000437645, ENST00000540011_5end |
EntrezGene: | EPHA10 |
HGNC: | 19987 |
UniProt: | F5GWI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |