FFCP PHASE1:Hg19::chr5:40909642..40909649,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=730 | |EntrezGene=730 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1346 | |HGNC=1346 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPA5,Q05CI3,P10643 | |UniProt=E7EPA5,Q05CI3,P10643 | ||
|association_with_transcript=43bp_to_ENST00000440677,ENST00000515157,NM_000587,uc003jmh.2,uc011cpn.1_5end | |association_with_transcript=43bp_to_ENST00000440677,ENST00000515157,NM_000587,uc003jmh.2,uc011cpn.1_5end | ||
|cluster_id=chr5:40909642..40909649,+ | |||
|coexpression_cluster_id=C4499 | |coexpression_cluster_id=C4499 | ||
|description=CAGE_peak_2_at_C7_5end | |description=CAGE_peak_2_at_C7_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;3.62e-07;3 | |ontology_enrichment_celltype_v019=CL:0000746;3.62e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,3.78e-07,3;CL:0000513,3.78e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.63e-10;7!CL:0000513;3.62e-07;3!UBERON:0006603;9.11e-07;65 | |ontology_enrichment_development_v019=UBERON:0004872;4.63e-10;7!CL:0000513;3.62e-07;3!UBERON:0006603;9.11e-07;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.08e-64!115;UBERON:0002616!1.11e-19!59;UBERON:0000073!4.05e-18!94;UBERON:0001016!4.05e-18!94;UBERON:0001049!5.40e-18!57;UBERON:0005068!5.40e-18!57;UBERON:0006241!5.40e-18!57;UBERON:0007135!5.40e-18!57;UBERON:0001017!2.99e-17!82;UBERON:0005743!9.69e-17!86;UBERON:0000955!1.25e-16!69;UBERON:0006238!1.25e-16!69;UBERON:0003075!2.76e-15!86;UBERON:0007284!2.76e-15!86;UBERON:0002346!7.52e-15!90;UBERON:0000481!2.40e-14!347;UBERON:0000477!2.95e-13!286;UBERON:0007100!1.39e-12!27;UBERON:0000153!8.88e-12!129;UBERON:0007811!8.88e-12!129;UBERON:0003080!3.21e-11!42;UBERON:0003103!6.06e-11!69;UBERON:0004111!9.74e-11!241;UBERON:0000025!1.52e-10!194;UBERON:0002780!1.79e-10!41;UBERON:0001890!1.79e-10!41;UBERON:0006240!1.79e-10!41;UBERON:0000033!2.56e-10!123;UBERON:0004121!5.75e-10!169;UBERON:0000924!7.02e-10!173;UBERON:0006601!7.02e-10!173;UBERON:0000062!9.50e-10!511;UBERON:0000948!9.64e-10!24;UBERON:0005498!9.64e-10!24;UBERON:0004140!9.64e-10!24;UBERON:0009881!9.64e-10!24;UBERON:0004141!9.64e-10!24;UBERON:0003084!9.64e-10!24;UBERON:0007005!9.64e-10!24;UBERON:0004139!9.64e-10!24;UBERON:0004291!9.64e-10!24;UBERON:0000119!1.17e-09!312;UBERON:0000468!6.99e-09!659;UBERON:0000483!9.94e-09!309;UBERON:0000922!1.40e-08!612;UBERON:0003076!1.53e-08!15;UBERON:0003057!1.53e-08!15;UBERON:0000475!1.65e-08!365;UBERON:0002050!2.78e-08!605;UBERON:0005423!2.78e-08!605;UBERON:0000923!6.51e-08!604;UBERON:0005291!6.51e-08!604;UBERON:0006598!6.51e-08!604;UBERON:0002532!6.51e-08!604;UBERON:0000467!2.22e-07!625;UBERON:0000480!2.60e-07!626;UBERON:0001893!3.12e-07!34;UBERON:0003056!7.13e-07!61;UBERON:0002791!9.68e-07!33;UBERON:0005284!9.73e-07!5 | |ontology_enrichment_uberon=UBERON:0007023!6.08e-64!115;UBERON:0002616!1.11e-19!59;UBERON:0000073!4.05e-18!94;UBERON:0001016!4.05e-18!94;UBERON:0001049!5.40e-18!57;UBERON:0005068!5.40e-18!57;UBERON:0006241!5.40e-18!57;UBERON:0007135!5.40e-18!57;UBERON:0001017!2.99e-17!82;UBERON:0005743!9.69e-17!86;UBERON:0000955!1.25e-16!69;UBERON:0006238!1.25e-16!69;UBERON:0003075!2.76e-15!86;UBERON:0007284!2.76e-15!86;UBERON:0002346!7.52e-15!90;UBERON:0000481!2.40e-14!347;UBERON:0000477!2.95e-13!286;UBERON:0007100!1.39e-12!27;UBERON:0000153!8.88e-12!129;UBERON:0007811!8.88e-12!129;UBERON:0003080!3.21e-11!42;UBERON:0003103!6.06e-11!69;UBERON:0004111!9.74e-11!241;UBERON:0000025!1.52e-10!194;UBERON:0002780!1.79e-10!41;UBERON:0001890!1.79e-10!41;UBERON:0006240!1.79e-10!41;UBERON:0000033!2.56e-10!123;UBERON:0004121!5.75e-10!169;UBERON:0000924!7.02e-10!173;UBERON:0006601!7.02e-10!173;UBERON:0000062!9.50e-10!511;UBERON:0000948!9.64e-10!24;UBERON:0005498!9.64e-10!24;UBERON:0004140!9.64e-10!24;UBERON:0009881!9.64e-10!24;UBERON:0004141!9.64e-10!24;UBERON:0003084!9.64e-10!24;UBERON:0007005!9.64e-10!24;UBERON:0004139!9.64e-10!24;UBERON:0004291!9.64e-10!24;UBERON:0000119!1.17e-09!312;UBERON:0000468!6.99e-09!659;UBERON:0000483!9.94e-09!309;UBERON:0000922!1.40e-08!612;UBERON:0003076!1.53e-08!15;UBERON:0003057!1.53e-08!15;UBERON:0000475!1.65e-08!365;UBERON:0002050!2.78e-08!605;UBERON:0005423!2.78e-08!605;UBERON:0000923!6.51e-08!604;UBERON:0005291!6.51e-08!604;UBERON:0006598!6.51e-08!604;UBERON:0002532!6.51e-08!604;UBERON:0000467!2.22e-07!625;UBERON:0000480!2.60e-07!626;UBERON:0001893!3.12e-07!34;UBERON:0003056!7.13e-07!61;UBERON:0002791!9.68e-07!33;UBERON:0005284!9.73e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.71e-18;25!UBERON:0000948;5.46e-14;22!UBERON:0007023;1.03e-10;114!UBERON:0004151;5.88e-08;3!UBERON:0003978;1.09e-07;3!UBERON:0000946;1.09e-07;3!UBERON:0003103;5.40e-07;61 | |ontology_enrichment_uberon_v019=UBERON:0007100;1.71e-18;25!UBERON:0000948;5.46e-14;22!UBERON:0007023;1.03e-10;114!UBERON:0004151;5.88e-08;3!UBERON:0003978;1.09e-07;3!UBERON:0000946;1.09e-07;3!UBERON:0003103;5.40e-07;61 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.34e-42,114;UBERON:0007100,8.87e-17,27;UBERON:0003103,4.80e-15,68;UBERON:0000948,1.68e-12,24;UBERON:0005498,1.68e-12,24;UBERON:0004140,1.68e-12,24;UBERON:0009881,1.68e-12,24;UBERON:0004141,1.68e-12,24;UBERON:0003084,1.68e-12,24;UBERON:0007005,1.68e-12,24;UBERON:0004139,1.68e-12,24;UBERON:0004291,1.68e-12,24;UBERON:0011216,6.32e-09,223;UBERON:0004151,5.83e-08,3;UBERON:0003978,1.01e-07,3;UBERON:0009751,1.01e-07,3;UBERON:0000946,1.01e-07,3;UBERON:0002523,1.01e-07,3;UBERON:0005983,1.01e-07,3;UBERON:0002165,1.01e-07,3;UBERON:0002062,1.01e-07,3;UBERON:0007280,1.01e-07,3;UBERON:0006947,8.42e-07,3;UBERON:0004054,8.42e-07,3 | |||
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| ||
|short_description=p2@C7 | |short_description=p2@C7 | ||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p2@C7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C7_5end |
Coexpression cluster: | C4499_Fibroblast_ovary_Cardiac_kidney_Mesenchymal_left_heart |
Association with transcript: | 43bp_to_ENST00000440677, ENST00000515157, NM_000587, uc003jmh.2, uc011cpn.1_5end |
EntrezGene: | C7 |
HGNC: | 1346 |
UniProt: | E7EPA5Q05CI3P10643 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 3.78e-07 | 3 |
cardiac muscle myoblast | 3.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.34e-42 | 114 |
primary circulatory organ | 8.87e-17 | 27 |
compound organ | 4.80e-15 | 68 |
heart | 1.68e-12 | 24 |
primitive heart tube | 1.68e-12 | 24 |
primary heart field | 1.68e-12 | 24 |
anterior lateral plate mesoderm | 1.68e-12 | 24 |
heart tube | 1.68e-12 | 24 |
heart primordium | 1.68e-12 | 24 |
cardiac mesoderm | 1.68e-12 | 24 |
cardiogenic plate | 1.68e-12 | 24 |
heart rudiment | 1.68e-12 | 24 |
organ system subdivision | 6.32e-09 | 223 |
cardiac chamber | 5.83e-08 | 3 |
valve | 1.01e-07 | 3 |
cardiac mesenchyme | 1.01e-07 | 3 |
cardial valve | 1.01e-07 | 3 |
tunica intima | 1.01e-07 | 3 |
heart layer | 1.01e-07 | 3 |
endocardium | 1.01e-07 | 3 |
endocardial cushion | 1.01e-07 | 3 |
presumptive endocardium | 1.01e-07 | 3 |
male genital duct | 8.42e-07 | 3 |
internal male genitalia | 8.42e-07 | 3 |