FFCP PHASE1:Hg19::chr11:394157..394180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11187 | |EntrezGene=11187 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9025 | |HGNC=9025 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRW6 | |UniProt=E9PRW6 | ||
|association_with_transcript=12bp_to_ENST00000528036_5end | |association_with_transcript=12bp_to_ENST00000528036_5end | ||
|cluster_id=chr11:394157..394180,+ | |||
|coexpression_cluster_id=C511 | |coexpression_cluster_id=C511 | ||
|description=CAGE_peak_3_at_PKP3_5end | |description=CAGE_peak_3_at_PKP3_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.31e-47!254;CL:0002076!8.33e-27!43;CL:0000223!3.28e-23!59;CL:0002251!1.64e-12!21;CL:0002368!3.13e-12!13;CL:0002159!2.19e-11!13;CL:0002202!3.58e-08!9;CL:0002632!3.58e-08!9;CL:0000082!8.18e-08!19;CL:0000076!9.03e-08!62;CL:0000240!7.71e-07!6;CL:0000311!7.71e-07!6;CL:0000079!7.71e-07!6;CL:0000237!7.71e-07!6;CL:0000036!7.71e-07!6;CL:0000357!7.71e-07!6;CL:0000114!7.71e-07!6 | |ontology_enrichment_celltype=CL:0000066!1.31e-47!254;CL:0002076!8.33e-27!43;CL:0000223!3.28e-23!59;CL:0002251!1.64e-12!21;CL:0002368!3.13e-12!13;CL:0002159!2.19e-11!13;CL:0002202!3.58e-08!9;CL:0002632!3.58e-08!9;CL:0000082!8.18e-08!19;CL:0000076!9.03e-08!62;CL:0000240!7.71e-07!6;CL:0000311!7.71e-07!6;CL:0000079!7.71e-07!6;CL:0000237!7.71e-07!6;CL:0000036!7.71e-07!6;CL:0000357!7.71e-07!6;CL:0000114!7.71e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.24e-27;42!CL:0002251;6.54e-17;20!CL:0002368;7.71e-17;13!CL:0002159;2.12e-14;14!CL:0002202;4.09e-11;9!CL:0002632;4.09e-11;9!CL:0000240;3.82e-09;6!CL:0000311;3.82e-09;6!CL:0000079;3.82e-09;6!CL:0000237;3.82e-09;6!CL:0000349;1.97e-08;19!CL:0000362;7.74e-08;9!CL:0000312;7.81e-08;5!CL:0000244;1.52e-07;4!CL:0000731;1.52e-07;4!CL:0002327;1.53e-07;4!CL:0000622;7.41e-07;5 | |ontology_enrichment_celltype_v019=CL:0002076;3.24e-27;42!CL:0002251;6.54e-17;20!CL:0002368;7.71e-17;13!CL:0002159;2.12e-14;14!CL:0002202;4.09e-11;9!CL:0002632;4.09e-11;9!CL:0000240;3.82e-09;6!CL:0000311;3.82e-09;6!CL:0000079;3.82e-09;6!CL:0000237;3.82e-09;6!CL:0000349;1.97e-08;19!CL:0000362;7.74e-08;9!CL:0000312;7.81e-08;5!CL:0000244;1.52e-07;4!CL:0000731;1.52e-07;4!CL:0002327;1.53e-07;4!CL:0000622;7.41e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.70e-45,253;CL:0002076,2.81e-36,42;CL:0000223,1.95e-27,58;CL:0002251,5.11e-17,20;CL:0002368,5.58e-17,13;CL:0002159,2.16e-14,14;CL:0002202,3.34e-11,9;CL:0002632,3.34e-11,9;CL:0000076,2.48e-09,63;CL:0000240,4.52e-09,6;CL:0000311,4.52e-09,6;CL:0000079,4.52e-09,6;CL:0000237,4.52e-09,6;CL:0000036,4.52e-09,6;CL:0000357,4.52e-09,6;CL:0000114,4.52e-09,6;CL:0000349,1.94e-08,19;CL:0000362,8.99e-08,9;CL:0000312,9.79e-08,5;CL:0000244,1.29e-07,4;CL:0000731,1.29e-07,4;CL:0002327,1.54e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;3.29e-14;58!CL:0000357;3.82e-09;6!CL:0000114;3.82e-09;6!UBERON:0008947;1.41e-08;29 | |ontology_enrichment_development_v019=CL:0000223;3.29e-14;58!CL:0000357;3.82e-09;6!CL:0000114;3.82e-09;6!UBERON:0008947;1.41e-08;29 | ||
|ontology_enrichment_disease=DOID:305!1.20e-39!106;DOID:0050687!1.31e-27!143;DOID:162!2.87e-14!235;DOID:1749!7.34e-14!14;DOID:14566!2.13e-13!239;DOID:299!9.34e-11!25 | |ontology_enrichment_disease=DOID:305!1.20e-39!106;DOID:0050687!1.31e-27!143;DOID:162!2.87e-14!235;DOID:1749!7.34e-14!14;DOID:14566!2.13e-13!239;DOID:299!9.34e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.20e-19;14!DOID:305;2.52e-09;106!DOID:299;6.38e-09;25 | |ontology_enrichment_disease_v019=DOID:1749;7.20e-19;14!DOID:305;2.52e-09;106!DOID:299;6.38e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.32e-29,106;DOID:0050687,4.58e-21,143;DOID:1749,4.85e-19,14;DOID:162,2.24e-10,235;DOID:14566,8.14e-10,239;DOID:299,3.65e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.17e-34!169;UBERON:0000925!2.17e-34!169;UBERON:0006595!2.17e-34!169;UBERON:0001004!3.08e-25!72;UBERON:0001007!3.86e-25!155;UBERON:0001555!3.86e-25!155;UBERON:0007026!3.86e-25!155;UBERON:0000077!9.11e-23!130;UBERON:0004921!3.24e-22!129;UBERON:0004185!3.24e-22!129;UBERON:0000065!1.91e-21!53;UBERON:0008947!7.22e-18!38;UBERON:0003258!7.22e-18!38;UBERON:0001041!8.45e-18!98;UBERON:0000072!1.47e-16!46;UBERON:0005153!2.94e-14!37;UBERON:0005911!3.75e-14!82;UBERON:0005157!1.84e-11!51;UBERON:0005178!3.60e-11!34;UBERON:0002224!3.60e-11!34;UBERON:0005181!1.25e-10!35;UBERON:0005631!1.35e-10!14;UBERON:0000158!1.35e-10!14;UBERON:0000464!1.73e-10!104;UBERON:0000466!2.94e-09!126;UBERON:0002048!4.16e-09!22;UBERON:0000117!4.16e-09!22;UBERON:0000171!4.16e-09!22;UBERON:0000170!4.16e-09!22;UBERON:0005597!4.16e-09!22;UBERON:0000118!4.16e-09!22;UBERON:0000161!4.30e-09!35;UBERON:0004807!1.23e-08!28;UBERON:0001737!1.34e-08!9;UBERON:0001557!1.65e-08!19;UBERON:0004175!1.76e-08!25;UBERON:0000915!2.10e-08!52;UBERON:0003124!2.95e-08!7;UBERON:0005795!3.35e-08!22;UBERON:0005156!5.88e-08!59;UBERON:0000990!5.88e-08!59;UBERON:0004802!8.18e-08!19;UBERON:0000115!8.18e-08!19;UBERON:0000995!9.83e-08!21;UBERON:0003100!1.20e-07!41;UBERON:0000344!1.25e-07!12;UBERON:0000166!1.38e-07!21;UBERON:0000064!3.27e-07!219;UBERON:0001048!3.41e-07!168;UBERON:0003975!3.49e-07!22;UBERON:0000062!4.15e-07!511 | |ontology_enrichment_uberon=UBERON:0004119!2.17e-34!169;UBERON:0000925!2.17e-34!169;UBERON:0006595!2.17e-34!169;UBERON:0001004!3.08e-25!72;UBERON:0001007!3.86e-25!155;UBERON:0001555!3.86e-25!155;UBERON:0007026!3.86e-25!155;UBERON:0000077!9.11e-23!130;UBERON:0004921!3.24e-22!129;UBERON:0004185!3.24e-22!129;UBERON:0000065!1.91e-21!53;UBERON:0008947!7.22e-18!38;UBERON:0003258!7.22e-18!38;UBERON:0001041!8.45e-18!98;UBERON:0000072!1.47e-16!46;UBERON:0005153!2.94e-14!37;UBERON:0005911!3.75e-14!82;UBERON:0005157!1.84e-11!51;UBERON:0005178!3.60e-11!34;UBERON:0002224!3.60e-11!34;UBERON:0005181!1.25e-10!35;UBERON:0005631!1.35e-10!14;UBERON:0000158!1.35e-10!14;UBERON:0000464!1.73e-10!104;UBERON:0000466!2.94e-09!126;UBERON:0002048!4.16e-09!22;UBERON:0000117!4.16e-09!22;UBERON:0000171!4.16e-09!22;UBERON:0000170!4.16e-09!22;UBERON:0005597!4.16e-09!22;UBERON:0000118!4.16e-09!22;UBERON:0000161!4.30e-09!35;UBERON:0004807!1.23e-08!28;UBERON:0001737!1.34e-08!9;UBERON:0001557!1.65e-08!19;UBERON:0004175!1.76e-08!25;UBERON:0000915!2.10e-08!52;UBERON:0003124!2.95e-08!7;UBERON:0005795!3.35e-08!22;UBERON:0005156!5.88e-08!59;UBERON:0000990!5.88e-08!59;UBERON:0004802!8.18e-08!19;UBERON:0000115!8.18e-08!19;UBERON:0000995!9.83e-08!21;UBERON:0003100!1.20e-07!41;UBERON:0000344!1.25e-07!12;UBERON:0000166!1.38e-07!21;UBERON:0000064!3.27e-07!219;UBERON:0001048!3.41e-07!168;UBERON:0003975!3.49e-07!22;UBERON:0000062!4.15e-07!511 | ||
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| ||
|short_description=p3@PKP3 | |short_description=p3@PKP3 | ||
}} | }} |
Latest revision as of 22:43, 17 September 2015
Short description: | p3@PKP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PKP3_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 12bp_to_ENST00000528036_5end |
EntrezGene: | PKP3 |
HGNC: | 9025 |
UniProt: | E9PRW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.70e-45 | 253 |
endo-epithelial cell | 2.81e-36 | 42 |
endodermal cell | 1.95e-27 | 58 |
epithelial cell of alimentary canal | 5.11e-17 | 20 |
respiratory epithelial cell | 5.58e-17 | 13 |
general ecto-epithelial cell | 2.16e-14 | 14 |
epithelial cell of tracheobronchial tree | 3.34e-11 | 9 |
epithelial cell of lower respiratory tract | 3.34e-11 | 9 |
squamous epithelial cell | 2.48e-09 | 63 |
stratified squamous epithelial cell | 4.52e-09 | 6 |
keratin accumulating cell | 4.52e-09 | 6 |
stratified epithelial cell | 4.52e-09 | 6 |
keratinizing barrier epithelial cell | 4.52e-09 | 6 |
epithelial fate stem cell | 4.52e-09 | 6 |
stratified epithelial stem cell | 4.52e-09 | 6 |
surface ectodermal cell | 4.52e-09 | 6 |
extraembryonic cell | 1.94e-08 | 19 |
epidermal cell | 8.99e-08 | 9 |
keratinocyte | 9.79e-08 | 5 |
transitional epithelial cell | 1.29e-07 | 4 |
urothelial cell | 1.29e-07 | 4 |
mammary gland epithelial cell | 1.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.32e-29 | 106 |
cell type cancer | 4.58e-21 | 143 |
squamous cell carcinoma | 4.85e-19 | 14 |
cancer | 2.24e-10 | 235 |
disease of cellular proliferation | 8.14e-10 | 239 |
adenocarcinoma | 3.65e-09 | 25 |