FFCP PHASE1:Hg19::chr4:48683194..48683232,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285527 | |EntrezGene=285527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29127 | |HGNC=29127 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9B9 | |UniProt=D6R9B9 | ||
|association_with_transcript=-6bp_to_ENST00000505759_5end | |association_with_transcript=-6bp_to_ENST00000505759_5end | ||
|cluster_id=chr4:48683194..48683232,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_3_at_FRYL_5end | |description=CAGE_peak_3_at_FRYL_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.03e-13;2!CL:0000558;2.03e-13;2 | |ontology_enrichment_celltype_v019=CL:0000764;2.03e-13;2!CL:0000558;2.03e-13;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.03e-13,2;CL:0000765,2.03e-13,2;CL:0000050,2.03e-13,2;CL:0000038,2.03e-13,2;CL:0000558,2.03e-13,2;CL:0000547,2.03e-13,2;CL:0000549,2.03e-13,2;CL:0000550,2.03e-13,2;CL:0000552,2.03e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.10e-07;1!UBERON:0006242;5.45e-07;1 | |ontology_enrichment_development_v019=UBERON:0001045;2.10e-07;1!UBERON:0006242;5.45e-07;1 | ||
|ontology_enrichment_disease=DOID:1036!5.91e-10!8 | |ontology_enrichment_disease=DOID:1036!5.91e-10!8 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.92e-17;8!DOID:8692;1.10e-07;31 | |ontology_enrichment_disease_v019=DOID:1036;1.92e-17;8!DOID:8692;1.10e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.89e-17,8;DOID:8692,5.38e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-21!115;UBERON:0005409!1.97e-10!35;UBERON:0000160!5.87e-09!27;UBERON:0000178!1.70e-08!15;UBERON:0000179!1.70e-08!15;UBERON:0000463!1.70e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!1.76e-21!115;UBERON:0005409!1.97e-10!35;UBERON:0000160!5.87e-09!27;UBERON:0000178!1.70e-08!15;UBERON:0000179!1.70e-08!15;UBERON:0000463!1.70e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.26e-20;17!UBERON:0005409;1.34e-19;22!UBERON:0000178;2.08e-17;15!UBERON:0000179;2.08e-17;15!UBERON:0000463;2.08e-17;15!UBERON:0000059;1.60e-13;11!UBERON:0004921;5.70e-12;33!UBERON:0002108;1.86e-11;4!UBERON:0001155;4.62e-11;9!UBERON:0002390;7.99e-10;32!UBERON:0001154;2.10e-07;1!UBERON:0001153;2.10e-07;1!UBERON:0009854;2.10e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000160;3.26e-20;17!UBERON:0005409;1.34e-19;22!UBERON:0000178;2.08e-17;15!UBERON:0000179;2.08e-17;15!UBERON:0000463;2.08e-17;15!UBERON:0000059;1.60e-13;11!UBERON:0004921;5.70e-12;33!UBERON:0002108;1.86e-11;4!UBERON:0001155;4.62e-11;9!UBERON:0002390;7.99e-10;32!UBERON:0001154;2.10e-07;1!UBERON:0001153;2.10e-07;1!UBERON:0009854;2.10e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.64e-21,25;UBERON:0000160,3.06e-20,17;UBERON:0000178,1.61e-17,15;UBERON:0000179,1.61e-17,15;UBERON:0000463,1.61e-17,15;UBERON:0000059,1.52e-13,11;UBERON:0002108,1.83e-11,4;UBERON:0001155,4.62e-11,9;UBERON:0007023,2.54e-08,114;UBERON:0001154,2.10e-07,1;UBERON:0001153,2.10e-07,1;UBERON:0001045,2.10e-07,1 | |||
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| ||
|short_description=p3@FRYL | |short_description=p3@FRYL | ||
}} | }} |
Latest revision as of 22:59, 17 September 2015
Short description: | p3@FRYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FRYL_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -6bp_to_ENST00000505759_5end |
EntrezGene: | FRYL |
HGNC: | 29127 |
UniProt: | D6R9B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.03e-13 | 2 |
erythroblast | 2.03e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 2.03e-13 | 2 |
erythroid progenitor cell | 2.03e-13 | 2 |
reticulocyte | 2.03e-13 | 2 |
proerythroblast | 2.03e-13 | 2 |
basophilic erythroblast | 2.03e-13 | 2 |
polychromatophilic erythroblast | 2.03e-13 | 2 |
orthochromatic erythroblast | 2.03e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.64e-21 | 25 |
intestine | 3.06e-20 | 17 |
blood | 1.61e-17 | 15 |
haemolymphatic fluid | 1.61e-17 | 15 |
organism substance | 1.61e-17 | 15 |
large intestine | 1.52e-13 | 11 |
small intestine | 1.83e-11 | 4 |
colon | 4.62e-11 | 9 |
adult organism | 2.54e-08 | 114 |
vermiform appendix | 2.10e-07 | 1 |
caecum | 2.10e-07 | 1 |
midgut | 2.10e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.89e-17 | 8 |
myeloid leukemia | 5.38e-08 | 31 |