FFCP PHASE1:Hg19::chr5:42423535..42423601,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:42423535..42423601,+ to FFCP PHASE1:Hg19::chr5:42423535..42423601,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2690 | |EntrezGene=2690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4263 | |HGNC=4263 | ||
|TSSclassifier=strong | |||
|UniProt=P10912 | |UniProt=P10912 | ||
|association_with_transcript=-275bp_to_NM_000163_5end | |||
|cluster_id=chr5:42423535..42423601,+ | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_1_at_GHR_5end | |||
|id=chr5:42423535..42423601,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.26e-10!180;CL:0000136!2.82e-09!15;CL:0000057!7.42e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.11e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.72e-10,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.78e-23!365;UBERON:0007023!2.85e-18!115;UBERON:0000468!9.12e-15!659;UBERON:0000481!4.00e-14!347;UBERON:0000119!1.16e-11!312;UBERON:0000467!1.44e-11!625;UBERON:0000480!2.47e-11!626;UBERON:0000483!3.06e-11!309;UBERON:0002100!1.48e-10!216;UBERON:0000477!3.93e-09!286;UBERON:0004111!6.67e-09!241;UBERON:0003102!7.95e-09!95;UBERON:0003075!1.99e-08!86;UBERON:0007284!1.99e-08!86;UBERON:0004121!2.06e-08!169;UBERON:0000922!3.60e-08!612;UBERON:0000924!6.93e-08!173;UBERON:0006601!6.93e-08!173;UBERON:0002616!9.71e-08!59;UBERON:0002050!1.04e-07!605;UBERON:0005423!1.04e-07!605;UBERON:0001049!1.18e-07!57;UBERON:0005068!1.18e-07!57;UBERON:0006241!1.18e-07!57;UBERON:0007135!1.18e-07!57;UBERON:0002346!1.25e-07!90;UBERON:0000923!1.76e-07!604;UBERON:0005291!1.76e-07!604;UBERON:0006598!1.76e-07!604;UBERON:0002532!1.76e-07!604;UBERON:0000062!2.37e-07!511;UBERON:0000914!2.90e-07!83;UBERON:0002329!2.90e-07!83;UBERON:0003077!2.90e-07!83;UBERON:0003059!2.90e-07!83;UBERON:0007282!2.90e-07!83;UBERON:0009618!2.90e-07!83;UBERON:0007285!2.90e-07!83;UBERON:0000153!3.34e-07!129;UBERON:0007811!3.34e-07!129;UBERON:0000033!5.33e-07!123;UBERON:0003104!7.10e-07!238;UBERON:0009142!7.10e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.18e-19,114;UBERON:0010314,6.96e-10,132;UBERON:0000119,8.03e-07,309;UBERON:0003102,9.44e-07,99 | |||
|phase1_expression=7.81217030863394,5.56661362116556,13.8135316014052,6.00439790118782,12.9618717383913,7.85104671690332,17.7309914717817,8.84407822797563,13.0592814099919,0.737201809504527,0,0.436882744260345,0.263766978228454,1.8564952944007,1.65698687863958,0,0.602694528023977,0.730310090387373,0.487932798790507,2.33930010345897,1.22400414746552,0.940364164434263,0.572471974262113,0.821246550437305,0.753255837568817,0,0.0821005894499457,0.157421562627358,0,0,0,0.919421224478927,1.50602959389125,0.739508020333575,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,4.2194645408365,1.44575660953827,6.51739283826656,4.49024208778554,1.5905718941022,1.45990461090791,1.60709189178915,1.55210578223795,1.05401742831751,4.6497571801688,0.728590576585084,0.741568885568859,0,0,0,0,0,0,1.19257444420023,1.72046919021225,1.04142150482278,1.69592382577203,1.25849830862972,0.275118041940067,0.835979866147242,0.775250277507987,0.71153252537342,2.67776490211736,3.62546385398232,3.04108842287405,7.07779966889692,0,2.43042584364528,0.535798369704479,1.34717623575702,0.675668882899933,0,0,0.916008719652036,0,0,0,1.98788780678127,2.15271869829786,1.98613771219828,6.59724227722272,1.77334191099179,3.92474320099615,1.06748995729705,0.49333509683432,5.29058760179603,1.21239604862719,1.14423332179421,6.96244167166684,2.30470369792,0.468642863667593,1.87296046098192,3.4228309292667,4.03511437489863,7.63324241184472,6.151171885989,7.30344194851692,3.67477508258808,1.22834317311768,4.13303124703062,0,1.48360157567134,7.28129089550421,0,3.36672227908132,2.50237039743928,2.77064115484183,3.07284334616587,1.22595118319608,2.70428506031874,1.24775401476023,3.40840307808838,1.70845911054854,1.27159140695737,1.80054657650641,0.618315175430633,3.09168648054755,2.60563598864226,2.19409231913646,1.16924406193438,2.27190396819703,1.10459878370759,2.42469085228218,2.84007674013291,1.0075209822764,0.67824236924195,1.54608682530637,1.36373060295417,0.573609190778008,0.487894824518382,0.662648841607426,0.348581828608555,1.24393266018445,0.756962552626885,1.82488679537915,1.56449532329816,1.28648187638577,1.38134921352481,8.8229906326076,10.1063127433742,0,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,2.95262181849859,1.40241773803446,1.6462960453256,0,21.5483559197112,32.4332981503617,21.859226547212,0,0.122988438543114,1.71567810298526,2.63400684980701,2.24803506515239,1.00528972411631,1.66659201285353,0.325808305310325,1.03993478527958,1.44331342025273,1.73895607462615,1.76113041353732,3.03169540298255,1.85194205030644,3.42457474022277,0,0.858486162094873,0,0,0,0,0.671928512795438,0.425325291727159,0.53735113621709,1.45316969256981,0.766765358330422,0,0,0.207328115540772,0,0,2.22242630022592,2.67391897890794,3.51652341630141,1.71072446022705,1.13110241973656,1.50171528921959,5.43070221998099,2.35475277125258,1.74384027533312,3.0802080044799,0.904902010304444,10.7296933755565,2.535908257668,0.26593811658487,0,0.514414748524284,0,0.532844358032199,7.14889968290738,0,0,2.60588947434988,2.84313558994037,0.791951872933429,5.12446941001296,3.48613383440118,6.99810938274399,0,0,0,5.99062138728957,9.18895486672911,1.42636905040718,3.76431397335706,5.54786070886035,3.9393411912777,0,0,0,0,4.57370323600434,3.90419561572865,0.773288812777695,0.335032530668698,0,0,0,0,3.43536176813592,1.00034104211935,0.813795071099207,1.87173775377726,1.07057393278297,0.946214490203608,0.702848489956279,3.61135319673263,6.82222512167955,1.03473071292505,2.65690239414175,0.921845842708516,1.04260337361699,1.76221041716467,0.343143423810856,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,4.21783273291921,2.60885354589706,2.80660094433074,4.74114852246094,6.65219423786715,2.73451665944133,7.42090332224955,0.925258162815933,2.13074070375753,0.492762936082855,0.519254429183621,1.04589340613963,0.966875596732978,2.00506470303285,3.03867263488458,0.34444334449382,0.546273504020151,1.57349297951309,0,0.0770153371044148,0,0,0,1.13733384070897,0.510281115829547,0.431831832204279,3.08454505380579,0,0,0.254876273045038,0,0,0,0,0.769350375349168,0.984043937099117,0.976135183992909,9.37673205994273,6.40986253728404,6.93079799332939,1.14853107599234,0.650060246036521,4.82051789532479,0.870036464629098,3.54311819363682,4.29810289233163,0.964856007391714,5.6932729780185,3.0453505721988,1.78975917573812,2.1367688555217,1.65284915360978,1.92190067365106,6.63586104971837,2.93357564481095,1.39453664789186,2.51849877464512,1.3940745403212,1.23213432070436,0.532306030317022,1.73986598415015,2.59453906745488,5.58187058293766,9.30395923399168,1.2655176988749,0.953150969619124,0.511795582622668,0.42793898803392,1.27281299170375,0.78494864019923,4.13706652441624,6.58888871366531,4.24124648444471,1.01091240786658,3.1702064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| ||
|short_description=p1@GHR | |||
}} | }} |
Latest revision as of 22:59, 17 September 2015
Short description: | p1@GHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GHR_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -275bp_to_NM_000163_5end |
EntrezGene: | GHR |
HGNC: | 4263 |
UniProt: | P10912 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.72e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.18e-19 | 114 |
structure with developmental contribution from neural crest | 6.96e-10 | 132 |
cell layer | 8.03e-07 | 309 |
surface structure | 9.44e-07 | 99 |