FFCP PHASE1:Hg19::chr5:42423806..42423824,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2690 | |EntrezGene=2690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4263 | |HGNC=4263 | ||
|TSSclassifier=strong | |||
|UniProt=P10912 | |UniProt=P10912 | ||
|association_with_transcript=-52bp_to_NM_000163_5end | |association_with_transcript=-52bp_to_NM_000163_5end | ||
|cluster_id=chr5:42423806..42423824,+ | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_4_at_GHR_5end | |description=CAGE_peak_4_at_GHR_5end | ||
|id=chr5:42423806..42423824,+ | |id=chr5:42423806..42423824,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;9.12e-15;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.43e-12,15 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.06e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-17!115;UBERON:0000475!5.23e-12!365;UBERON:0000468!1.95e-08!659;UBERON:0000481!8.72e-08!347;UBERON:0002100!1.90e-07!216;UBERON:0000467!5.66e-07!625;UBERON:0000483!6.63e-07!309;UBERON:0000119!7.04e-07!312;UBERON:0000480!7.09e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!1.12e-17!115;UBERON:0000475!5.23e-12!365;UBERON:0000468!1.95e-08!659;UBERON:0000481!8.72e-08!347;UBERON:0002100!1.90e-07!216;UBERON:0000467!5.66e-07!625;UBERON:0000483!6.63e-07!309;UBERON:0000119!7.04e-07!312;UBERON:0000480!7.09e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0001443;2.02e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.68e-11,114;UBERON:0001443,3.37e-07,11 | |||
|phase1_expression=1.09007027562334,2.78330681058278,1.9733616573436,0,0.893922188854576,0,0,5.05375898741465,8.61912573059467,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.579386075843295,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,1.30979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,2.28081631715554,0.976248230192678,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0.605429710579726,0.576175924479999,0,0.936480230490962,0.570471821544449,0.747243402759005,0.939475989150119,1.29498355494505,0.842704840213491,0.61246251376468,0.122834317311768,0,0,0,0,0.718618141816238,0.336672227908132,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,11.7939266001315,9.45263850690247,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.253991577168676,0,0,5.13217338068116,0,0,0,0,0,0.4400297149257,0,7.15312891703765,0.845302752556,0,0,0,0,0,0.714889968290738,0,0,1.30294473717494,2.13235169245527,0,1.20575750823834,0,0.99972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.512556597022804,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,5.564214628977,0.54941678891006,0.577566499444116,0,0,1.6068392984416,0.096670718292122,1.07834031980251,1.07452572308291,0,0.859361958946189,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0.510450849978337,0.2023155617111,0,0,0.6970372701606,0,0,0,0,0.715624433709956,1.86079184679834,0.316379424718726,0,0,0,0,0.78494864019923,0.179872457583315,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,1.15755106853338,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.844430541190656,0.987884678879706,0,0,0.384888450902048,0,0,6.96664125748166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.96255619048879,0,0,0,0.23874448473769,0.890894042497916,0,0.994147647766298,0.281338832821026,0,0,0,1.59398390600856,0.828851746593443,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.278304294485554,0,1.04171104434093,3.06109999986685,2.17499872630438,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,1.25481369850743,1.07730361905316,0,0.69169171316418,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,2.4441205797345,1.77912677208373,0.494255755786011,0.313265848516366,0.337005664903385,4.01288823649394,0.234264445725339,0,0,0,0.394584402849391,2.41981432097328,0,3.47526187956684,0.150323419414493,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0.693373365065693,0,0,0,1.22308667769421,0,0,0,0,0.775912131907355,0.353024506766001,1.12990370390266,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,1.37275998289572,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0.684526894459965,0,0,0,1.95497680890578,2.7499250881402,0.717873024576814,0,0.858452096273142,2.00854311697685,3.89664140423012,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,1.57611414598396,1.73100140845494,0.105600336519406,0,0,0,1.32418394073086,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,1.19271615249795,0.113312091520126,9.08623848804111,3.97520666736664,0.129282956361551,0.26446520348538,0,0,1.28144895081234,3.93010762749165,0.828478110694391,0,0,0,0.638341257770182,27.2008901684737,19.5538117337706,24.2013005643135,37.3774799009177,0,0,0.122026264901963,0.3755727921195,2.29363678276028,0.554645257684261,0.310482014706917,0.553394539744923,0,0.303298235083296,1.14186133417987,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0.318593534327405,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71553273099941,0,0,0.231522474323834,0,0,1.23520578864389,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,1.10463570151104,0.139879507719444,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,1.98916222116275,1.42899623863589,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,0.546974809018219,0.548257766857182,3.47347824872506,0,0,0,0,0,0.227662191351298,1.5966426629275,0,0,0.203909198930495,0,0,0.333694205676207,2.04082041411336,0.314231179832004,0,0,0.215927591218621,0,0.500335809236594,0,0,7.64976398131349,0,0.414432328326074,0.51215543128185,0.691259661814092,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,8.41657488344263,6.7757452525123,1.1598144313382,0.485710993059139,0,0,0,0.11294608203896,0,0,0.694567422971502,0.437119121007915,0,1.47088993052343,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0.375935671919414,1.61144719933943,0,0,0,0,0,1.37618785021362,0,0,0.135982980381829,0,1.0580536810308,0.371995018166751,1.84870251452567,0,0,0,0.380095503034311,0,0,0.36757959813938,0,0.833565680400634,0,1.65833887891756,0,1.91910583710883,1.42838658878244,0.0645889098360061,0.434523000071005,0,1.14564884900697,0.404234377916439,1.52401723527873,0,0.202056159043763,1.2192774916755,1.33064142618405,0,0,0,0,0,2.32258743947446,0.813792356631477,3.32878387092756,1.61019034872821,6.09080135376143 | |phase1_expression=1.09007027562334,2.78330681058278,1.9733616573436,0,0.893922188854576,0,0,5.05375898741465,8.61912573059467,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.579386075843295,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,1.30979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,2.28081631715554,0.976248230192678,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0.605429710579726,0.576175924479999,0,0.936480230490962,0.570471821544449,0.747243402759005,0.939475989150119,1.29498355494505,0.842704840213491,0.61246251376468,0.122834317311768,0,0,0,0,0.718618141816238,0.336672227908132,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,11.7939266001315,9.45263850690247,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.253991577168676,0,0,5.13217338068116,0,0,0,0,0,0.4400297149257,0,7.15312891703765,0.845302752556,0,0,0,0,0,0.714889968290738,0,0,1.30294473717494,2.13235169245527,0,1.20575750823834,0,0.99972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.512556597022804,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,5.564214628977,0.54941678891006,0.577566499444116,0,0,1.6068392984416,0.096670718292122,1.07834031980251,1.07452572308291,0,0.859361958946189,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0.510450849978337,0.2023155617111,0,0,0.6970372701606,0,0,0,0,0.715624433709956,1.86079184679834,0.316379424718726,0,0,0,0,0.78494864019923,0.179872457583315,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,1.15755106853338,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.844430541190656,0.987884678879706,0,0,0.384888450902048,0,0,6.96664125748166,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.96255619048879,0,0,0,0.23874448473769,0.890894042497916,0,0.994147647766298,0.281338832821026,0,0,0,1.59398390600856,0.828851746593443,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.278304294485554,0,1.04171104434093,3.06109999986685,2.17499872630438,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0.110579259931225,0,0.219385397153973,0,1.25481369850743,1.07730361905316,0,0.69169171316418,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.23840590304675,2.4441205797345,1.77912677208373,0.494255755786011,0.313265848516366,0.337005664903385,4.01288823649394,0.234264445725339,0,0,0,0.394584402849391,2.41981432097328,0,3.47526187956684,0.150323419414493,0.103688191397247,0.664653872707185,0,0.313932918407225,0,0,0.693373365065693,0,0,0,1.22308667769421,0,0,0,0,0.775912131907355,0.353024506766001,1.12990370390266,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,1.37275998289572,0,0.124252535565433,0,0,0.104602846312333,0.101998217636322,0,0,0.684526894459965,0,0,0,1.95497680890578,2.7499250881402,0.717873024576814,0,0.858452096273142,2.00854311697685,3.89664140423012,0.360299883542404,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0.121499113316049,0.335434687599266,1.57611414598396,1.73100140845494,0.105600336519406,0,0,0,1.32418394073086,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,1.19271615249795,0.113312091520126,9.08623848804111,3.97520666736664,0.129282956361551,0.26446520348538,0,0,1.28144895081234,3.93010762749165,0.828478110694391,0,0,0,0.638341257770182,27.2008901684737,19.5538117337706,24.2013005643135,37.3774799009177,0,0,0.122026264901963,0.3755727921195,2.29363678276028,0.554645257684261,0.310482014706917,0.553394539744923,0,0.303298235083296,1.14186133417987,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0.147855149989634,0.318593534327405,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71553273099941,0,0,0.231522474323834,0,0,1.23520578864389,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,1.10463570151104,0.139879507719444,3.73246356019784,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,1.98916222116275,1.42899623863589,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,0.546974809018219,0.548257766857182,3.47347824872506,0,0,0,0,0,0.227662191351298,1.5966426629275,0,0,0.203909198930495,0,0,0.333694205676207,2.04082041411336,0.314231179832004,0,0,0.215927591218621,0,0.500335809236594,0,0,7.64976398131349,0,0.414432328326074,0.51215543128185,0.691259661814092,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,8.41657488344263,6.7757452525123,1.1598144313382,0.485710993059139,0,0,0,0.11294608203896,0,0,0.694567422971502,0.437119121007915,0,1.47088993052343,0,0.392616934229891,0.297046400327086,0.8453114551668,0,0.375935671919414,1.61144719933943,0,0,0,0,0,1.37618785021362,0,0,0.135982980381829,0,1.0580536810308,0.371995018166751,1.84870251452567,0,0,0,0.380095503034311,0,0,0.36757959813938,0,0.833565680400634,0,1.65833887891756,0,1.91910583710883,1.42838658878244,0.0645889098360061,0.434523000071005,0,1.14564884900697,0.404234377916439,1.52401723527873,0,0.202056159043763,1.2192774916755,1.33064142618405,0,0,0,0,0,2.32258743947446,0.813792356631477,3.32878387092756,1.61019034872821,6.09080135376143 | ||
|short_description=p4@GHR | |short_description=p4@GHR | ||
}} | }} |
Latest revision as of 23:00, 17 September 2015
Short description: | p4@GHR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GHR_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -52bp_to_NM_000163_5end |
EntrezGene: | GHR |
HGNC: | 4263 |
UniProt: | P10912 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.43e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.68e-11 | 114 |
chest | 3.37e-07 | 11 |