FFCP PHASE1:Hg19::chr5:42807162..42807221,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10751 | |HGNC=10751 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=178bp_to_ENST00000514403_5end | |association_with_transcript=178bp_to_ENST00000514403_5end | ||
|cluster_id=chr5:42807162..42807221,- | |||
|coexpression_cluster_id=C951 | |coexpression_cluster_id=C951 | ||
|description=CAGE_peak_2_at_SEPP1_5end | |description=CAGE_peak_2_at_SEPP1_5end | ||
|id=chr5:42807162..42807221,- | |id=chr5:42807162..42807221,- | ||
|ontology_enrichment_celltype=CL:0000235;2.80e-10;6!CL:0000182;3.80e-09;12!CL:0002619;9.38e-09;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000235;2.80e-10;6!CL:0000182;3.80e-09;12!CL:0002619;9.38e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.42e-10,6;CL:0000182,5.06e-09,12;CL:0002619,9.44e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.02e-09;11!UBERON:0009497;4.87e-08;13!UBERON:0006241;6.92e-08;3!UBERON:0003057;6.92e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007023;5.32e-09;114!UBERON:0002107;6.40e-09;19!UBERON:0006925;6.40e-09;19!UBERON:0002240;6.92e-08;3!UBERON:0005174;6.92e-08;3!UBERON:0001137;6.92e-08;3!UBERON:0002423;1.04e-07;25!UBERON:0006947;1.47e-07;3!UBERON:0004054;1.47e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-43!115;UBERON:0001049!2.90e-19!57;UBERON:0005068!2.90e-19!57;UBERON:0006241!2.90e-19!57;UBERON:0007135!2.90e-19!57;UBERON:0001017!3.98e-15!82;UBERON:0002346!8.58e-15!90;UBERON:0003075!1.63e-14!86;UBERON:0007284!1.63e-14!86;UBERON:0005743!1.65e-14!86;UBERON:0002616!2.41e-14!59;UBERON:0000955!1.79e-13!69;UBERON:0006238!1.79e-13!69;UBERON:0000073!2.99e-13!94;UBERON:0001016!2.99e-13!94;UBERON:0000062!8.47e-13!511;UBERON:0003080!1.16e-11!42;UBERON:0002780!6.32e-11!41;UBERON:0001890!6.32e-11!41;UBERON:0006240!6.32e-11!41;UBERON:0002020!1.89e-10!34;UBERON:0003528!1.89e-10!34;UBERON:0001893!6.08e-10!34;UBERON:0000468!8.22e-10!659;UBERON:0002791!1.29e-09!33;UBERON:0003076!1.59e-09!15;UBERON:0003057!1.59e-09!15;UBERON:0001869!1.38e-08!32;UBERON:0000475!1.57e-08!365;UBERON:0000922!2.22e-08!612;UBERON:0002298!2.63e-08!8;UBERON:0003056!3.15e-08!61;UBERON:0000467!6.09e-08!625;UBERON:0000480!7.46e-08!626;UBERON:0000481!1.10e-07!347;UBERON:0004732!1.28e-07!13;UBERON:0002050!1.39e-07!605;UBERON:0005423!1.39e-07!605;UBERON:0002619!1.60e-07!22;UBERON:0001950!1.82e-07!20;UBERON:0000924!2.10e-07!173;UBERON:0006601!2.10e-07!173;UBERON:0000923!2.88e-07!604;UBERON:0005291!2.88e-07!604;UBERON:0006598!2.88e-07!604;UBERON:0002532!2.88e-07!604;UBERON:0000153!3.15e-07!129;UBERON:0007811!3.15e-07!129;UBERON:0000025!3.57e-07!194;UBERON:0000483!3.67e-07!309;UBERON:0004121!4.21e-07!169;UBERON:0000119!7.26e-07!312;UBERON:0004733!7.67e-07!12;UBERON:0002028!7.67e-07!12;UBERON:0007277!7.67e-07!12;UBERON:0000033!8.42e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;5.32e-09;114!UBERON:0002107;6.40e-09;19!UBERON:0006925;6.40e-09;19!UBERON:0002240;6.92e-08;3!UBERON:0005174;6.92e-08;3!UBERON:0001137;6.92e-08;3!UBERON:0002423;1.04e-07;25!UBERON:0006947;1.47e-07;3!UBERON:0004054;1.47e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.60e-32,114;UBERON:0001049,2.09e-09,56;UBERON:0005068,2.09e-09,56;UBERON:0006241,2.09e-09,56;UBERON:0007135,2.09e-09,56;UBERON:0011216,4.24e-09,223;UBERON:0002107,7.90e-09,19;UBERON:0006925,7.90e-09,19;UBERON:0008836,7.90e-09,19;UBERON:0003076,1.89e-08,15;UBERON:0003057,1.89e-08,15;UBERON:0002240,8.10e-08,3;UBERON:0005174,8.10e-08,3;UBERON:0001137,8.10e-08,3;UBERON:0009497,1.07e-07,25;UBERON:0000015,1.07e-07,25;UBERON:0002423,1.07e-07,25;UBERON:0006235,1.07e-07,25;UBERON:0004161,1.07e-07,25;UBERON:0006947,1.61e-07,3;UBERON:0004054,1.61e-07,3;UBERON:0001017,2.07e-07,81;UBERON:0008835,2.30e-07,22;UBERON:0003894,2.30e-07,22;UBERON:0009854,5.78e-07,23;UBERON:0001016,6.39e-07,89;UBERON:0000073,9.93e-07,53;UBERON:0002616,9.93e-07,53 | |||
|phase1_expression=1.45342703416445,3.63970890614671,2.67813367782345,0,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0.382067028739756,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,24.8546176406316,11.0123846446453,14.1666562198803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15877215168659,0,0,0.189069634328136,0.221729397462564,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,20.2808055714929,7.86261773342101,5.90789906681404,0,1.10689594688802,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,2.46217006087397,0,1.18904929830983,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0.301439377059586,0,0.199945982364114,15.8110914833548,12.5564272858032,27.4084121327941,0,0,0,0.289562613335158,1.2328579353023,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0.768834895534206,0.511707249066704,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.24328093181778,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0,0,0,0,0,1.28381696410176,0,0,0.359744915166629,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0.987884678879706,0,0,0.0962221127255121,0,0,8.09636686680301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,1.17206543417515,0,0.334330152832435,0,0,0,0,0,0.703347082052564,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.986434056369336,0,0,3.87733098438087,1.76259386507517,0,0,0.262379999988587,2.89999830173917,0,0.254253650292766,0.945550727071745,0,0,0,0,0.60298219312704,0,1.21637185924347,1.77328571372128,1.53569778007781,0,0,2.07765697960252,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.32686346755009,4.888241159469,0,0,0,1.01101699471016,1.60515529459758,3.74823113160543,0,0,0,1.18375320854817,8.46935012340647,0,0.947798694427319,0,0.622129148383483,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0.581934098930517,0,2.25980740780532,0,0,0.189932387867636,0.391102765469606,0,1.92107695265417,0.19980960958213,0.144090417154106,0,0.686379991447858,0,0,0,0,0.209205692624666,0.101998217636322,0,0.600420288709789,2.60120219894787,0,0,0,1.39641200636127,0.229160424011684,0,0.199679000498991,1.28767814440971,0.446342914883745,0.268733889946905,0,0,3.15132729228895,4.69770392772649,3.63979136812598,0.196854963029498,0,0,0.953423842781029,0.160753148465019,0.275078873194468,0,0,0,0.0607495566580247,0.670869375198532,0.945668487590378,0.209818352539992,0,0,0,9.29103924285377,1.98627591109629,0,1.62899880526114,0,0.979762080328227,0,0,0,0.339936274560377,8.79313402068495,6.62534444561107,1.93924434542326,2.77688463659649,0,0,3.52398461473392,0.471612915298998,3.31391244277756,2.97699613087171,0,0,0,0,1.7548292581589,0,0.655745261419609,0.157054096250234,0,2.68457782784319,0.3755727921195,0.573409195690071,2.44043913381075,0.993542447062135,0,0,0,0,0,0,0.144921028610825,0,0,0,0.568209015825267,0.50313580350515,2.66943366478961,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637724760305049,0.619678821295011,0.558644917973244,0,0,0,0.705351887381368,0,0.256916900385838,0,2.07524016774297,1.23069818544453,0.504143392443436,0.138314504928436,1.45328081068666,1.42769420259154,0,0,0,0,0,0,0.397832444232549,1.12815492523886,0,0,0,0,0,0.135075169236789,1.56215619722769,0.413373593002368,0.253663240775627,0,0,1.98484471355718,0,0,0,0.336283722218824,0,0.455324382702595,1.33053555243958,0,1.02892805662451,0.679697329768317,0.328863867814245,0,0,1.02041020705668,0.628462359664008,0,1.82631744101899,0,0.47775168788705,0.500335809236594,0,0,0.173858272302579,0,0,0,0,0,0,0,5.92741870267301,0,0,0,0.111855431797792,0,0.121917924982269,0.647428837187895,0.718639647993729,0,3.88568794447312,0,0.198950775161368,0,0,0,0,5.78806185809585,13.1135736302374,0,0.245148321753905,0,6.67448788190814,2.37637120261669,2.113278637917,0,2.06764619555678,0.386747327841463,0,0,0,0.0802413666891683,0.730336388246517,0,5.0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| ||
|short_description=p2@SEPP1 | |short_description=p2@SEPP1 | ||
}} | }} |
Latest revision as of 23:17, 17 September 2015
Short description: | p2@SEPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEPP1_5end |
Coexpression cluster: | C951_CD14_Hepatocyte_liver_small_Monocytederived_substantia_spinal |
Association with transcript: | 178bp_to_ENST00000514403_5end |
EntrezGene: | NA |
HGNC: | 10751 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.42e-10 | 6 |
hepatocyte | 5.06e-09 | 12 |
adult endothelial progenitor cell | 9.44e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.60e-32 | 114 |
neural tube | 2.09e-09 | 56 |
neural rod | 2.09e-09 | 56 |
future spinal cord | 2.09e-09 | 56 |
neural keel | 2.09e-09 | 56 |
organ system subdivision | 4.24e-09 | 223 |
liver | 7.90e-09 | 19 |
digestive gland | 7.90e-09 | 19 |
liver bud | 7.90e-09 | 19 |
posterior neural tube | 1.89e-08 | 15 |
chordal neural plate | 1.89e-08 | 15 |
spinal cord | 8.10e-08 | 3 |
dorsal region element | 8.10e-08 | 3 |
dorsum | 8.10e-08 | 3 |
epithelium of foregut-midgut junction | 1.07e-07 | 25 |
anatomical boundary | 1.07e-07 | 25 |
hepatobiliary system | 1.07e-07 | 25 |
foregut-midgut junction | 1.07e-07 | 25 |
septum transversum | 1.07e-07 | 25 |
male genital duct | 1.61e-07 | 3 |
internal male genitalia | 1.61e-07 | 3 |
central nervous system | 2.07e-07 | 81 |
hepatic diverticulum | 2.30e-07 | 22 |
liver primordium | 2.30e-07 | 22 |
digestive tract diverticulum | 5.78e-07 | 23 |
nervous system | 6.39e-07 | 89 |
regional part of nervous system | 9.93e-07 | 53 |
regional part of brain | 9.93e-07 | 53 |