FFCP PHASE1:Hg19::chr2:16804394..16804406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81553 | |EntrezGene=81553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25373 | |HGNC=25373 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H0Q0 | |UniProt=Q9H0Q0 | ||
|association_with_transcript=-50bp_to_ENST00000355549,uc010exm.1_5end | |association_with_transcript=-50bp_to_ENST00000355549,uc010exm.1_5end | ||
|cluster_id=chr2:16804394..16804406,- | |||
|description=CAGE_peak_6_at_FAM49A_5end | |description=CAGE_peak_6_at_FAM49A_5end | ||
|id=chr2:16804394..16804406,- | |id=chr2:16804394..16804406,- | ||
|ontology_enrichment_celltype=CL:0000188!8.61e-14!9;CL:0002541!3.23e-12!3;CL:0002057!6.15e-08!42;CL:0000860!2.90e-07!45 | |ontology_enrichment_celltype=CL:0000188!8.61e-14!9;CL:0002541!3.23e-12!3;CL:0002057!6.15e-08!42;CL:0000860!2.90e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.67e-30;3!CL:0000319;1.87e-23;1!CL:0000342;4.10e-23;1!CL:0002565;4.10e-23;1!CL:0000159;1.96e-12;2!CL:0000594;1.00e-08;3!CL:0000306;9.10e-07;4!CL:0002222;9.10e-07;4!CL:0002224;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.10e-30,3;CL:0000319,1.67e-23,1;CL:0000342,4.10e-23,1;CL:0002565,4.10e-23,1;CL:0000159,1.85e-12,2;CL:0000594,1.04e-08,3;CL:0000306,8.61e-07,4;CL:0002222,8.61e-07,4;CL:0002224,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.10e-23;1 | |||
|ontology_enrichment_disease=DOID:4468!1.50e-08!2 | |ontology_enrichment_disease=DOID:4468!1.50e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3030;1.87e-23;1!DOID:4468;2.90e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.67e-23,1;DOID:4468,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.23e-12!3;UBERON:0000920!3.23e-12!3;UBERON:0003124!5.59e-09!7;UBERON:0000488!1.80e-08!4;UBERON:0007625!8.13e-08!11;UBERON:0002200!9.44e-08!11;UBERON:0006876!9.44e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.67e-30;3!UBERON:0000920;2.67e-30;3!UBERON:0002506;4.10e-23;1!UBERON:0001769;4.10e-23;1!UBERON:0005631;8.09e-10;10!UBERON:0000158;8.09e-10;10!UBERON:0007625;6.35e-09;11!UBERON:0000478;6.39e-09;24!UBERON:0001801;3.34e-07;14!UBERON:0001987;9.10e-07;4!UBERON:0010077;9.10e-07;4!UBERON:0005389;9.10e-07;4!UBERON:0000488;9.10e-07;4!UBERON:0000484;9.10e-07;4!UBERON:0000965;9.10e-07;4!UBERON:0001803;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.10e-30,3;UBERON:0003124,9.99e-29,7;UBERON:0002506,4.10e-23,1;UBERON:0001769,4.10e-23,1;UBERON:0005631,9.29e-15,14;UBERON:0000158,9.29e-15,14;UBERON:0007625,6.10e-09,11;UBERON:0000478,6.93e-09,24;UBERON:0001801,3.24e-07,14;UBERON:0010077,8.61e-07,4;UBERON:0005389,8.61e-07,4;UBERON:0000484,8.61e-07,4;UBERON:0002546,8.61e-07,4;UBERON:0000965,8.61e-07,4;UBERON:0001803,8.61e-07,4;UBERON:0003073,8.61e-07,4;UBERON:0005426,8.61e-07,4;UBERON:0000488,9.11e-07,4 | |||
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| ||
|short_description=p6@FAM49A | |short_description=p6@FAM49A | ||
}} | }} |
Latest revision as of 00:28, 18 September 2015
Short description: | p6@FAM49A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM49A_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000355549, uc010exm.1_5end |
EntrezGene: | FAM49A |
HGNC: | 25373 |
UniProt: | Q9H0Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.10e-30 | 3 |
mucus secreting cell | 1.67e-23 | 1 |
pigment cell (sensu Vertebrata) | 4.10e-23 | 1 |
iris pigment epithelial cell | 4.10e-23 | 1 |
seromucus secreting cell | 1.85e-12 | 2 |
skeletal muscle satellite cell | 1.04e-08 | 3 |
crystallin accumulating cell | 8.61e-07 | 4 |
vertebrate lens cell | 8.61e-07 | 4 |
lens epithelial cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.10e-30 | 3 |
chorion | 9.99e-29 | 7 |
iris epithelium | 4.10e-23 | 1 |
iris | 4.10e-23 | 1 |
extraembryonic membrane | 9.29e-15 | 14 |
membranous layer | 9.29e-15 | 14 |
pigment epithelium of eye | 6.10e-09 | 11 |
extraembryonic structure | 6.93e-09 | 24 |
anterior segment of eyeball | 3.24e-07 | 14 |
cuboidal epithelium | 8.61e-07 | 4 |
transparent eye structure | 8.61e-07 | 4 |
simple cuboidal epithelium | 8.61e-07 | 4 |
cranial placode | 8.61e-07 | 4 |
lens of camera-type eye | 8.61e-07 | 4 |
epithelium of lens | 8.61e-07 | 4 |
lens placode | 8.61e-07 | 4 |
lens vesicle | 8.61e-07 | 4 |
atypical epithelium | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.67e-23 | 1 |
clear cell adenocarcinoma | 2.32e-12 | 2 |