FFCP PHASE1:Hg19::chr16:810919..810935,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |||
|association_with_transcript=-137bp_to_NM_013404_5end | |||
|cluster_id=chr16:810919..810935,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_4_at_MSLN_5end | |||
|id=chr16:810919..810935,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.01e-27!254;CL:0000077!6.55e-14!19;CL:0000076!1.04e-08!62;CL:0002076!1.30e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.75e-10;19!CL:0002577;2.41e-09;3!CL:0000077;4.15e-09;19!CL:0000307;2.10e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.98e-23,253;CL:0000349,1.73e-10,19;CL:0002577,2.41e-09,3;CL:0000077,3.74e-09,19;CL:0000076,2.36e-07,63;CL:0000068,3.52e-07,3;CL:0000069,3.52e-07,3;CL:0000307,3.52e-07,3;CL:0000377,3.52e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.39e-21;29!CL:0000377;2.10e-07;3 | |||
|ontology_enrichment_disease=DOID:305!2.04e-15!106;DOID:0050687!1.88e-09!143;DOID:299!3.21e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;7.87e-07;25!DOID:3493;8.71e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.44e-17,106;DOID:0050687,1.68e-11,143;DOID:162,1.54e-07,235;DOID:14566,3.44e-07,239;DOID:299,7.06e-07,25;DOID:170,8.17e-07,6;DOID:3493,8.49e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.05e-15!169;UBERON:0000925!1.05e-15!169;UBERON:0006595!1.05e-15!169;UBERON:0008947!1.68e-15!38;UBERON:0003258!1.68e-15!38;UBERON:0001737!1.27e-13!9;UBERON:0000077!4.88e-13!130;UBERON:0000065!5.83e-13!53;UBERON:0001004!7.43e-13!72;UBERON:0000464!1.76e-12!104;UBERON:0005631!1.99e-12!14;UBERON:0000158!1.99e-12!14;UBERON:0000466!7.75e-12!126;UBERON:0001007!1.68e-11!155;UBERON:0001555!1.68e-11!155;UBERON:0007026!1.68e-11!155;UBERON:0004921!6.07e-11!129;UBERON:0004185!6.07e-11!129;UBERON:0001041!7.45e-11!98;UBERON:0005177!4.77e-09!107;UBERON:0000072!7.03e-09!46;UBERON:0003124!7.98e-08!7;UBERON:0000064!1.23e-07!219;UBERON:0002553!1.71e-07!70;UBERON:0000058!2.63e-07!26;UBERON:0000478!3.24e-07!24;UBERON:0001987!3.53e-07!4;UBERON:0004340!3.53e-07!4;UBERON:0003133!4.25e-07!48;UBERON:0001851!5.54e-07!16;UBERON:0000080!6.00e-07!18;UBERON:0002120!6.00e-07!18;UBERON:0004875!6.00e-07!18;UBERON:0005721!6.00e-07!18;UBERON:0005754!6.00e-07!18;UBERON:0007297!6.00e-07!18;UBERON:0005181!6.16e-07!35;UBERON:0003886!7.40e-07!63;UBERON:0009569!9.04e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.99e-22;9!UBERON:0001557;7.99e-22;9!UBERON:0000065;2.68e-15;44!UBERON:0000072;4.37e-15;37!UBERON:0001004;1.83e-10;65!UBERON:0000305;5.20e-10;7!UBERON:0005631;1.03e-09;10!UBERON:0000158;1.03e-09;10!UBERON:0000478;1.15e-09;24!UBERON:0003126;2.48e-08;7!UBERON:0001005;2.48e-08;7!UBERON:0005181;4.15e-07;35!UBERON:0001987;4.49e-07;4!UBERON:0005178;7.97e-07;34!UBERON:0002224;7.97e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,2.10e-23,38;UBERON:0003258,2.10e-23,38;UBERON:0001737,7.46e-22,9;UBERON:0005631,5.84e-15,14;UBERON:0000158,5.84e-15,14;UBERON:0000065,8.69e-15,54;UBERON:0001004,2.70e-14,74;UBERON:0001041,1.01e-13,87;UBERON:0004119,1.37e-12,160;UBERON:0000925,1.37e-12,160;UBERON:0006595,1.37e-12,160;UBERON:0000072,2.27e-12,47;UBERON:0001007,9.59e-11,145;UBERON:0001555,9.59e-11,145;UBERON:0007026,9.59e-11,145;UBERON:0000305,5.07e-10,7;UBERON:0004921,7.40e-10,118;UBERON:0000478,1.20e-09,24;UBERON:0001557,2.28e-09,19;UBERON:0005181,7.67e-09,35;UBERON:0004871,1.05e-08,8;UBERON:0005177,1.67e-08,101;UBERON:0003126,3.06e-08,7;UBERON:0001005,3.06e-08,7;UBERON:0005178,1.08e-07,34;UBERON:0002224,1.08e-07,34;UBERON:0001048,1.22e-07,160;UBERON:0001987,4.50e-07,4;UBERON:0004340,4.50e-07,4;UBERON:0003124,9.45e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,5.46103430325431,4.22027165165526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,7.28590576585084,6.67411997011973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63826047591912,0,2.86804595389004,0,0,0,0,0,0,0,0,0,0,0,4.14073800139454,4.21461725195254,3.61516544825223,4.41175890929576,2.39667388501647,2.60997681022206,3.91010793664477,2.94332197688019,3.07797725557112,0,0,0.4115740113314,1.47008711385542,0,0,0,0,1.35287282397425,0,0.109750285408626,1.1240175325762,0.703702806881416,6.01824893530442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.716468181622786,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8219752864041,14.9791895559447,13.6075631998356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70719767744447,0.924184045252977,2.35304930753057,0,0,0,0,0,0,0.270946437543853,1.00337954770971,1.27438136522519,3.3243040357149,0.447749509444357,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.382838137483752,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,1.34060455107157,1.08890984861323,0.753150406214233,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,5.14584453560167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,82.8443362039784,10.3937638291424,87.2336393961819,0,0,0,0,0,1.39473591775749,0.828851746593443,0,0,0,0,0,6.44476228832193,0,0,0,0,0,0,0,0,0,0,2.04828206913899,0,0.945550727071745,0,0,0,0,0,0,0,0,0,30.7206467123552,0,0.615602068030377,0,0,0,0,19.1400695839152,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,0,0,0,0,3.21031058919516,0,0,2.93496928398135,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0.435296032902013,0.698906672968121,0,1.35458863804719,0.511625219603299,0.656923656425674,0.193978032976839,0,1.12990370390266,0,0,0,7.43095254392251,0.240476460754601,1.70762395791482,0.799238438328521,2.88180834308212,0,0,0.288109595976299,0,29.4617543270994,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.83927341015997,0,0,2.1110671705139,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,2.11444506695002,8.22263076771249,3.45849471219265,4.14239055347196,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,1.52322084867518,0,0,0.107410557042488,0,0,0,0,0,0,1.54095864325843,6.86213092399762,1.04397716786085,2.72047110614727,0.694567422971502,0.734210113519403,0.358177682162975,8.02883762618528,25.2176657015513,1.94358060540469,2.70079653579281,0.844712203265363,0,2.41801239211839,0,0,0,0,0.163565394255844,0,0,1.69049698686902,0,0,0,0,0,1.67855409263333,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5794168953344,0,0,0,0.163771917510097,19.664859466867,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.887023701626388,0,0,0,0,1.41832609060762,0,0.39246546425257,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0.17071847709395,1.38251932362818,0,0,0,0.423387050190929,9.6224884788501,0,0,5.14534986269845,25.8135114408089,9.63151607359928,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63182127587171,0,0.18378979906969,0,0.0757786982182394,0.267964130156178,0,0,0.852935927603924,0.714193294391221,0,0,0,0,0,0,0,0.336760265072938,3.65783247502649,2.99394320891412,0,7.15073217380694,0,1.52702843581198,2.34640942403454,0.244482888365733,0.813792356631477,0,0.201273793591026,0 | |||
|short_description=p4@MSLN | |||
}} |
Latest revision as of 00:31, 18 September 2015
Short description: | p4@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -137bp_to_NM_013404_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.98e-23 | 253 |
extraembryonic cell | 1.73e-10 | 19 |
placental epithelial cell | 2.41e-09 | 3 |
mesothelial cell | 3.74e-09 | 19 |
squamous epithelial cell | 2.36e-07 | 63 |
duct epithelial cell | 3.52e-07 | 3 |
branched duct epithelial cell | 3.52e-07 | 3 |
tracheal epithelial cell | 3.52e-07 | 3 |
tracheoblast | 3.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 2.10e-23 | 38 |
endoderm of foregut | 2.10e-23 | 38 |
larynx | 7.46e-22 | 9 |
extraembryonic membrane | 5.84e-15 | 14 |
membranous layer | 5.84e-15 | 14 |
respiratory tract | 8.69e-15 | 54 |
respiratory system | 2.70e-14 | 74 |
foregut | 1.01e-13 | 87 |
endoderm-derived structure | 1.37e-12 | 160 |
endoderm | 1.37e-12 | 160 |
presumptive endoderm | 1.37e-12 | 160 |
segment of respiratory tract | 2.27e-12 | 47 |
digestive system | 9.59e-11 | 145 |
digestive tract | 9.59e-11 | 145 |
primitive gut | 9.59e-11 | 145 |
amnion | 5.07e-10 | 7 |
subdivision of digestive tract | 7.40e-10 | 118 |
extraembryonic structure | 1.20e-09 | 24 |
upper respiratory tract | 2.28e-09 | 19 |
thoracic segment organ | 7.67e-09 | 35 |
somatic layer of lateral plate mesoderm | 1.05e-08 | 8 |
trunk region element | 1.67e-08 | 101 |
trachea | 3.06e-08 | 7 |
respiratory airway | 3.06e-08 | 7 |
thoracic cavity element | 1.08e-07 | 34 |
thoracic cavity | 1.08e-07 | 34 |
primordium | 1.22e-07 | 160 |
placenta | 4.50e-07 | 4 |
allantois | 4.50e-07 | 4 |
chorion | 9.45e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.44e-17 | 106 |
cell type cancer | 1.68e-11 | 143 |
cancer | 1.54e-07 | 235 |
disease of cellular proliferation | 3.44e-07 | 239 |
adenocarcinoma | 7.06e-07 | 25 |
endocrine gland cancer | 8.17e-07 | 6 |
signet ring cell adenocarcinoma | 8.49e-07 | 2 |