FFCP PHASE1:Hg19::chr3:35683102..35683115,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10777 | |EntrezGene=10777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |HGNC=16968 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQQ6 | |UniProt=C9JQQ6 | ||
|association_with_transcript=189bp_to_ENST00000449196_5end | |association_with_transcript=189bp_to_ENST00000449196_5end | ||
|cluster_id=chr3:35683102..35683115,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_30_at_ARPP21_5end | |description=CAGE_peak_30_at_ARPP21_5end | ||
|id=chr3:35683102..35683115,+ | |id=chr3:35683102..35683115,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;3.16e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.37e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002370;1.13e-57;2!UBERON:0005058;1.13e-57;2!UBERON:0009113;1.13e-57;2!UBERON:0004177;8.09e-24;5!UBERON:0005057;8.09e-24;5!UBERON:0002021;5.54e-07;5 | |||
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|short_description=p30@ARPP21 | |short_description=p30@ARPP21 | ||
}} | }} |
Latest revision as of 01:11, 18 September 2015
Short description: | p30@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_ARPP21_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 189bp_to_ENST00000449196_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | C9JQQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.78e-29 | 4 |
hemolymphoid system gland | 1.78e-29 | 4 |
thymic region | 1.78e-29 | 4 |
pharyngeal gland | 1.78e-29 | 4 |
thymus primordium | 1.78e-29 | 4 |
pharyngeal epithelium | 4.86e-20 | 6 |
hemopoietic organ | 2.46e-17 | 7 |
immune organ | 2.46e-17 | 7 |
neck | 1.89e-12 | 10 |
gland of gut | 1.89e-12 | 10 |
chordate pharynx | 1.89e-12 | 10 |
pharyngeal region of foregut | 1.89e-12 | 10 |
pharynx | 2.07e-11 | 11 |
entire pharyngeal arch endoderm | 2.07e-11 | 11 |
early pharyngeal endoderm | 2.07e-11 | 11 |
pharyngeal arch system | 2.44e-07 | 18 |
upper respiratory tract | 5.34e-07 | 19 |
occipital lobe | 5.38e-07 | 5 |