FFCP PHASE1:Hg19::chr11:45825896..45825965,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55343 | |EntrezGene=55343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20197 | |HGNC=20197 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A29,E9PLS1 | |UniProt=Q96A29,E9PLS1 | ||
|association_with_transcript=0bp_to_ENST00000314134,ENST00000530670_5end | |association_with_transcript=0bp_to_ENST00000314134,ENST00000530670_5end | ||
|cluster_id=chr11:45825896..45825965,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_SLC35C1_5end | |description=CAGE_peak_2_at_SLC35C1_5end | ||
|id=chr11:45825896..45825965,+ | |id=chr11:45825896..45825965,+ | ||
|ontology_enrichment_celltype=CL:0000220!2.05e-09!246;CL:0002321!8.36e-09!248;CL:0000222!3.09e-08!119;CL:0000192!4.67e-08!42;CL:0000514!4.67e-08!42;CL:0000183!6.58e-08!59;CL:0000680!7.39e-08!57;CL:0000056!7.39e-08!57;CL:0000355!7.39e-08!57;CL:0000187!1.28e-07!54;CL:0002371!2.76e-07!591 | |ontology_enrichment_celltype=CL:0000220!2.05e-09!246;CL:0002321!8.36e-09!248;CL:0000222!3.09e-08!119;CL:0000192!4.67e-08!42;CL:0000514!4.67e-08!42;CL:0000183!6.58e-08!59;CL:0000680!7.39e-08!57;CL:0000056!7.39e-08!57;CL:0000355!7.39e-08!57;CL:0000187!1.28e-07!54;CL:0002371!2.76e-07!591 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.83e-09,250;CL:0000222,2.26e-08,121;CL:0000192,2.95e-08,43;CL:0000514,2.95e-08,43;CL:0000680,4.00e-08,58;CL:0000056,4.00e-08,58;CL:0000355,4.00e-08,58;CL:0000187,6.92e-08,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.28e-12!216;UBERON:0005256!2.06e-11!143;UBERON:0000490!6.89e-10!138;UBERON:0003104!1.86e-09!238;UBERON:0009142!1.86e-09!238;UBERON:0004119!4.02e-09!169;UBERON:0000925!4.02e-09!169;UBERON:0006595!4.02e-09!169;UBERON:0003914!1.41e-08!118;UBERON:0000486!3.87e-08!82;UBERON:0000926!1.84e-07!448;UBERON:0004120!1.84e-07!448;UBERON:0006603!1.84e-07!448;UBERON:0009569!2.69e-07!113;UBERON:0000914!6.00e-07!83;UBERON:0002329!6.00e-07!83;UBERON:0003077!6.00e-07!83;UBERON:0003059!6.00e-07!83;UBERON:0007282!6.00e-07!83;UBERON:0009618!6.00e-07!83;UBERON:0007285!6.00e-07!83 | |ontology_enrichment_uberon=UBERON:0002100!1.28e-12!216;UBERON:0005256!2.06e-11!143;UBERON:0000490!6.89e-10!138;UBERON:0003104!1.86e-09!238;UBERON:0009142!1.86e-09!238;UBERON:0004119!4.02e-09!169;UBERON:0000925!4.02e-09!169;UBERON:0006595!4.02e-09!169;UBERON:0003914!1.41e-08!118;UBERON:0000486!3.87e-08!82;UBERON:0000926!1.84e-07!448;UBERON:0004120!1.84e-07!448;UBERON:0006603!1.84e-07!448;UBERON:0009569!2.69e-07!113;UBERON:0000914!6.00e-07!83;UBERON:0002329!6.00e-07!83;UBERON:0003077!6.00e-07!83;UBERON:0003059!6.00e-07!83;UBERON:0007282!6.00e-07!83;UBERON:0009618!6.00e-07!83;UBERON:0007285!6.00e-07!83 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.32e-12,199;UBERON:0000490,1.61e-10,148;UBERON:0005256,3.84e-10,122;UBERON:0004119,6.95e-10,160;UBERON:0000925,6.95e-10,160;UBERON:0006595,6.95e-10,160;UBERON:0003104,6.32e-09,160;UBERON:0009142,6.32e-09,160;UBERON:0003914,1.75e-08,117;UBERON:0000486,2.05e-08,83;UBERON:0007503,2.64e-07,78;UBERON:0009569,3.23e-07,112;UBERON:0001007,4.25e-07,145;UBERON:0001555,4.25e-07,145;UBERON:0007026,4.25e-07,145;UBERON:0002385,6.41e-07,64;UBERON:0001015,6.41e-07,64;UBERON:0000383,6.41e-07,64;UBERON:0002329,8.66e-07,71;UBERON:0003059,8.66e-07,71;UBERON:0007282,8.66e-07,71;UBERON:0004290,8.66e-07,71;UBERON:0009618,8.66e-07,71 | |||
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| ||
|short_description=p2@SLC35C1 | |short_description=p2@SLC35C1 | ||
}} | }} |
Latest revision as of 01:20, 18 September 2015
Short description: | p2@SLC35C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC35C1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000314134, ENST00000530670_5end |
EntrezGene: | SLC35C1 |
HGNC: | 20197 |
UniProt: | Q96A29E9PLS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.83e-09 | 250 |
mesodermal cell | 2.26e-08 | 121 |
smooth muscle cell | 2.95e-08 | 43 |
smooth muscle myoblast | 2.95e-08 | 43 |
muscle precursor cell | 4.00e-08 | 58 |
myoblast | 4.00e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.00e-08 | 58 |
muscle cell | 6.92e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.32e-12 | 199 |
unilaminar epithelium | 1.61e-10 | 148 |
trunk mesenchyme | 3.84e-10 | 122 |
endoderm-derived structure | 6.95e-10 | 160 |
endoderm | 6.95e-10 | 160 |
presumptive endoderm | 6.95e-10 | 160 |
mesenchyme | 6.32e-09 | 160 |
entire embryonic mesenchyme | 6.32e-09 | 160 |
epithelial tube | 1.75e-08 | 117 |
multilaminar epithelium | 2.05e-08 | 83 |
epithelial vesicle | 2.64e-07 | 78 |
subdivision of trunk | 3.23e-07 | 112 |
digestive system | 4.25e-07 | 145 |
digestive tract | 4.25e-07 | 145 |
primitive gut | 4.25e-07 | 145 |
muscle tissue | 6.41e-07 | 64 |
musculature | 6.41e-07 | 64 |
musculature of body | 6.41e-07 | 64 |
somite | 8.66e-07 | 71 |
presomitic mesoderm | 8.66e-07 | 71 |
presumptive segmental plate | 8.66e-07 | 71 |
dermomyotome | 8.66e-07 | 71 |
trunk paraxial mesoderm | 8.66e-07 | 71 |