FFCP PHASE1:Hg19::chr19:41281344..41281363,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53916,8190 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7076,9782 | |||
|TSSclassifier=strong | |||
|UniProt=Q16674 | |||
|association_with_transcript=44bp_to_ENST00000263369,uc002opb.3_5end | |||
|cluster_id=chr19:41281344..41281363,+ | |||
|description=CAGE_peak_2_at_MIA_5end,CAGE_peak_3_at_RAB4B_5end | |||
|id=chr19:41281344..41281363,+ | |||
|ontology_enrichment_celltype=CL:0000990!2.81e-12!8;CL:0000453!4.77e-10!5;CL:0000451!9.96e-10!10;CL:0000667!2.35e-08!6;CL:0000058!2.35e-08!6;CL:0000138!2.35e-08!6;CL:0000148!4.97e-08!10;CL:0000541!4.97e-08!10;CL:0000840!1.38e-07!5;CL:0001029!1.38e-07!5;CL:0000153!2.90e-07!9;CL:0000447!2.90e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.34e-14;5!CL:0000990;3.97e-12;8!CL:0002327;2.57e-11;4!CL:0001014;3.83e-10;2!CL:0001016;3.83e-10;2!CL:0000451;7.15e-10;10!CL:0000062;4.60e-08;9!CL:0000138;1.12e-07;6!CL:0000840;3.37e-07;5!CL:0002567;9.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,8.96e-15,5;CL:0000990,3.25e-12,8;CL:0002327,2.41e-11,4;CL:0001014,3.20e-10,2;CL:0001016,3.20e-10,2;CL:0000451,6.09e-10,10;CL:0000058,1.16e-07,6;CL:0000138,1.16e-07,6;CL:0000840,3.30e-07,5;CL:0001029,3.30e-07,5;CL:0002567,7.38e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;5.13e-10;2!DOID:3493;7.18e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.39e-10,2;DOID:3493,8.99e-10,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.57e-11;4!UBERON:0003127;5.13e-10;2!UBERON:0001829;1.28e-09;2!UBERON:0000341;2.35e-09;2!UBERON:0011135;2.95e-08;5!UBERON:0002216;2.95e-08;5!UBERON:0011134;2.95e-08;5!UBERON:0002209;2.95e-08;5!UBERON:0002213;2.95e-08;5!UBERON:0007844;2.95e-08;5!UBERON:0011138;2.95e-08;5!UBERON:0001130;2.95e-08;5!UBERON:0001066;2.95e-08;5!UBERON:0001468;2.95e-08;5!UBERON:0002331;1.25e-07;10!UBERON:0001044;5.97e-07;6!UBERON:0003293;5.97e-07;6!UBERON:0003294;5.97e-07;6!UBERON:0010047;5.97e-07;6!UBERON:0003408;5.97e-07;6!UBERON:0000167;5.97e-07;6!UBERON:0002418;9.19e-07;3!UBERON:0004755;9.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.41e-11,4;UBERON:0005333,2.41e-11,4;UBERON:0008425,2.41e-11,4;UBERON:0005311,2.41e-11,4;UBERON:0003127,4.81e-10,2;UBERON:0001829,9.82e-10,2;UBERON:0000341,1.59e-09,2;UBERON:0011135,2.53e-08,5;UBERON:0002216,2.53e-08,5;UBERON:0011134,2.53e-08,5;UBERON:0002209,2.53e-08,5;UBERON:0002213,2.53e-08,5;UBERON:0005856,2.53e-08,5;UBERON:0005866,2.53e-08,5;UBERON:0005863,2.53e-08,5;UBERON:0007844,2.53e-08,5;UBERON:0011138,2.53e-08,5;UBERON:0001130,2.53e-08,5;UBERON:0001066,2.53e-08,5;UBERON:0001468,2.53e-08,5;UBERON:0002331,1.25e-07,10;UBERON:0000358,1.25e-07,10;UBERON:0000307,1.25e-07,10;UBERON:0000091,1.25e-07,10;UBERON:0000087,1.25e-07,10;UBERON:0007010,1.25e-07,10;UBERON:0007806,1.25e-07,10;UBERON:0008780,1.25e-07,10;UBERON:0005728,1.25e-07,10;UBERON:0001044,5.73e-07,6;UBERON:0003293,5.73e-07,6;UBERON:0003294,5.73e-07,6;UBERON:0010047,5.73e-07,6;UBERON:0000167,5.73e-07,6;UBERON:0002418,8.55e-07,3;UBERON:0004755,8.55e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,1.65698687863958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.722878304769133,0,0.869079113764942,13.5198610998687,14.1124112387764,0,0,0,0.0654895377488563,0,0,1.29818957461873,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.77673522487913,6.39394664730716,8.81780162079986,0,0,0.207328115540772,0.144119953416961,0,0.571481048629521,3.4378958300245,0,1.71072446022705,0.616964956219941,8.70994867747361,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0.799266537048298,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.49076596687656,2.50085260529839,1.35632511849868,0,0,0,0,6.01892199455438,2.27407504055985,2.0694614258501,0,1.65932251687533,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.971281761183,6.30176088627165,7.62280231389824,0.067401132980677,0,0,0,0,1.21390189767046,0,0,0,1.45329133145522,0,0,0,1.323967823502,0.627865836814451,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,3.35373281427701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58564802544508,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,2.4747128070665,6.96421759102155,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57803499820801,3.42558400253961,1.17632909849086,0,0,0,0,0,0.757612021100357,2.26411111577318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,0.531459361253452,5.23409261618701,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0.496211178389294,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.571812353413251,0,0.348724276104376,0,0,0,0,0,1.29068207646083,0.354996002191696,0.0852134047591577,0,0,0,0,0,1.27595303699816,6.33973209907801,0,0,0,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0.297046400327086,0.8453114551668,0,0,0,0,0,0.352894871715692,0,0.730336388246517,1.83491713361816,0.573358332605805,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,0,0,1.49263787330687,1.66645102024618,0,0.186224142887574,0,0.0636471582781649,0,0.435433495793923,0,0.673520530145875,3.58611026963382,2.32862249582209,0,0,0,0,2.34640942403454,0.366724332548599,0,0,0.402547587182052,0.320568492303233 | |||
|short_description=p2@MIA,p3@RAB4B | |||
}} |
Latest revision as of 03:02, 18 September 2015
Short description: | p2@MIA, p3@RAB4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIA_5end, CAGE_peak_3_at_RAB4B_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000263369, uc002opb.3_5end |
EntrezGene: | 53916,8190 |
HGNC: | 9782&submit=Submit 7076, 9782 |
UniProt: | Q16674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 8.96e-15 | 5 |
conventional dendritic cell | 3.25e-12 | 8 |
mammary gland epithelial cell | 2.41e-11 | 4 |
CD1a-positive Langerhans cell | 3.20e-10 | 2 |
immature CD1a-positive Langerhans cell | 3.20e-10 | 2 |
dendritic cell | 6.09e-10 | 10 |
chondroblast | 1.16e-07 | 6 |
chondrocyte | 1.16e-07 | 6 |
immature conventional dendritic cell | 3.30e-07 | 5 |
common dendritic progenitor | 3.30e-07 | 5 |
light melanocyte | 7.38e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.39e-10 | 2 |
signet ring cell adenocarcinoma | 8.99e-10 | 2 |