FFCP PHASE1:Hg19::chr15:53082178..53082190,-: Difference between revisions
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|id=chr15:53082178..53082190,-
|short_description=p3@ONECUT1
|description=CAGE_peak_3_at_ONECUT1_5end
|association_with_transcript=18bp_to_ENST00000305901,NM_004498...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3175 | |EntrezGene=3175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8138 | |HGNC=8138 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBC0 | |UniProt=Q9UBC0 | ||
|association_with_transcript=18bp_to_ENST00000305901,NM_004498,uc002aci.1_5end | |||
|cluster_id=chr15:53082178..53082190,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_ONECUT1_5end | |||
|id=chr15:53082178..53082190,- | |||
|ontology_enrichment_celltype=CL:0000181!9.88e-21!12;CL:0000417!9.88e-21!12;CL:0000668!9.88e-21!12;CL:0000414!9.88e-21!12;CL:0000412!9.88e-21!12;CL:0000182!9.88e-21!12;CL:0002322!1.86e-09!5;CL:0000223!7.01e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.05e-27;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.14e-27,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.82e-30;11!UBERON:0009497;1.58e-25;13!UBERON:0006242;5.42e-15;1!UBERON:0003104;2.46e-10;31!UBERON:0001041;2.53e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.37e-21!19;UBERON:0006925!4.37e-21!19;UBERON:0008836!4.37e-21!19;UBERON:0009497!2.05e-19!25;UBERON:0000015!2.05e-19!25;UBERON:0002423!2.05e-19!25;UBERON:0006235!2.05e-19!25;UBERON:0004161!2.05e-19!25;UBERON:0005057!2.79e-18!26;UBERON:0008835!5.45e-18!22;UBERON:0003894!5.45e-18!22;UBERON:0009854!3.88e-17!23;UBERON:0000988!1.10e-15!3;UBERON:0007499!1.23e-15!25;UBERON:0002298!2.50e-15!8;UBERON:0009856!5.66e-15!26;UBERON:0004733!3.14e-14!12;UBERON:0002028!3.14e-14!12;UBERON:0007277!3.14e-14!12;UBERON:0004732!4.30e-13!13;UBERON:0002365!2.68e-12!31;UBERON:0002330!2.68e-12!31;UBERON:0000949!5.51e-12!45;UBERON:0003929!1.77e-11!54;UBERON:0003076!2.84e-11!15;UBERON:0003057!2.84e-11!15;UBERON:0002148!3.00e-11!2;UBERON:0009662!3.00e-11!2;UBERON:0002368!1.04e-10!35;UBERON:0005172!2.22e-09!55;UBERON:0005173!2.22e-09!55;UBERON:0002680!5.57e-09!9;UBERON:0001895!5.57e-09!9;UBERON:0010092!5.57e-09!9;UBERON:0002417!3.01e-08!61;UBERON:0000916!3.01e-08!61;UBERON:0005911!5.47e-08!82;UBERON:0006331!8.93e-08!3;UBERON:0001896!2.06e-07!3;UBERON:0005290!2.06e-07!3;UBERON:0010096!2.06e-07!3;UBERON:0002530!5.03e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.58e-34;19!UBERON:0006925;8.58e-34;19!UBERON:0002423;2.10e-33;25!UBERON:0002365;1.30e-19;31!UBERON:0002330;1.30e-19;31!UBERON:0002368;4.93e-18;33!UBERON:0000949;5.35e-13;43!UBERON:0005172;3.49e-10;52!UBERON:0005173;3.49e-10;52!UBERON:0002417;4.71e-07;58!UBERON:0000916;4.71e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.24e-34,19;UBERON:0006925,9.24e-34,19;UBERON:0008836,9.24e-34,19;UBERON:0009497,2.24e-33,25;UBERON:0000015,2.24e-33,25;UBERON:0002423,2.24e-33,25;UBERON:0006235,2.24e-33,25;UBERON:0004161,2.24e-33,25;UBERON:0008835,4.16e-29,22;UBERON:0003894,4.16e-29,22;UBERON:0009854,7.98e-28,23;UBERON:0007499,1.44e-25,25;UBERON:0009856,1.44e-24,26;UBERON:0002365,1.55e-20,31;UBERON:0002330,1.55e-20,31;UBERON:0000949,3.09e-18,45;UBERON:0002368,3.89e-18,35;UBERON:0003929,4.27e-15,54;UBERON:0005172,4.27e-15,54;UBERON:0005173,4.27e-15,54;UBERON:0002417,1.64e-13,60;UBERON:0000916,1.64e-13,60;UBERON:0002530,1.51e-10,59;UBERON:0005177,8.86e-10,101;UBERON:0005911,1.12e-09,82;UBERON:0001041,5.81e-07,87;UBERON:0009569,7.26e-07,112 | |||
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|short_description=p3@ONECUT1 | |||
}} | }} |
Latest revision as of 03:15, 18 September 2015
Short description: | p3@ONECUT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ONECUT1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 18bp_to_ENST00000305901, NM_004498, uc002aci.1_5end |
EntrezGene: | ONECUT1 |
HGNC: | 8138 |
UniProt: | Q9UBC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.14e-27 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 9.24e-34 | 19 |
digestive gland | 9.24e-34 | 19 |
liver bud | 9.24e-34 | 19 |
epithelium of foregut-midgut junction | 2.24e-33 | 25 |
anatomical boundary | 2.24e-33 | 25 |
hepatobiliary system | 2.24e-33 | 25 |
foregut-midgut junction | 2.24e-33 | 25 |
septum transversum | 2.24e-33 | 25 |
hepatic diverticulum | 4.16e-29 | 22 |
liver primordium | 4.16e-29 | 22 |
digestive tract diverticulum | 7.98e-28 | 23 |
epithelial sac | 1.44e-25 | 25 |
sac | 1.44e-24 | 26 |
exocrine gland | 1.55e-20 | 31 |
exocrine system | 1.55e-20 | 31 |
endocrine system | 3.09e-18 | 45 |
endocrine gland | 3.89e-18 | 35 |
gut epithelium | 4.27e-15 | 54 |
abdomen element | 4.27e-15 | 54 |
abdominal segment element | 4.27e-15 | 54 |
abdominal segment of trunk | 1.64e-13 | 60 |
abdomen | 1.64e-13 | 60 |
gland | 1.51e-10 | 59 |
trunk region element | 8.86e-10 | 101 |
endo-epithelium | 1.12e-09 | 82 |
foregut | 5.81e-07 | 87 |
subdivision of trunk | 7.26e-07 | 112 |