FFCP PHASE1:Hg19::chr12:31882130..31882150,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=196394 | |EntrezGene=196394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27281 | |HGNC=27281 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IY45 | |UniProt=Q8IY45 | ||
|association_with_transcript=-22bp_to_ENST00000281471,NM_001113402,NR_004854,uc001rko.3,uc001rkp.3,uc001rkq.3,uc009zjs.2,uc009zjt.1,uc010skc.1_5end | |association_with_transcript=-22bp_to_ENST00000281471,NM_001113402,NR_004854,uc001rko.3,uc001rkp.3,uc001rkq.3,uc009zjs.2,uc009zjt.1,uc010skc.1_5end | ||
|cluster_id=chr12:31882130..31882150,- | |||
|description=CAGE_peak_4_at_AMN1_5end | |description=CAGE_peak_4_at_AMN1_5end | ||
|id=chr12:31882130..31882150,- | |id=chr12:31882130..31882150,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;1.48e-40;1!CL:0002372;1.48e-40;1!CL:0000056;3.10e-11;4!CL:0000737;3.10e-11;4!CL:0000680;5.70e-07;7 | |ontology_enrichment_celltype_v019=CL:0000228;1.48e-40;1!CL:0002372;1.48e-40;1!CL:0000056;3.10e-11;4!CL:0000737;3.10e-11;4!CL:0000680;5.70e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000228,9.91e-41,1;CL:0002372,9.91e-41,1;CL:0000737,2.80e-11,4;CL:0000515,2.80e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000515;3.10e-11;4 | |ontology_enrichment_development_v019=CL:0000515;3.10e-11;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!6.87e-23!41;UBERON:0001890!6.87e-23!41;UBERON:0006240!6.87e-23!41;UBERON:0001893!2.22e-22!34;UBERON:0001869!2.44e-22!32;UBERON:0003080!3.74e-22!42;UBERON:0002791!5.00e-21!33;UBERON:0002020!1.45e-18!34;UBERON:0003528!1.45e-18!34;UBERON:0001049!3.43e-18!57;UBERON:0005068!3.43e-18!57;UBERON:0006241!3.43e-18!57;UBERON:0007135!3.43e-18!57;UBERON:0002619!1.49e-17!22;UBERON:0001950!1.75e-17!20;UBERON:0002616!2.82e-17!59;UBERON:0007023!2.87e-16!115;UBERON:0000955!2.16e-15!69;UBERON:0006238!2.16e-15!69;UBERON:0003056!3.12e-15!61;UBERON:0000956!6.16e-15!25;UBERON:0000203!6.16e-15!25;UBERON:0002346!7.17e-13!90;UBERON:0001017!1.46e-12!82;UBERON:0000153!3.33e-12!129;UBERON:0007811!3.33e-12!129;UBERON:0003075!6.63e-12!86;UBERON:0007284!6.63e-12!86;UBERON:0005743!1.44e-11!86;UBERON:0000033!7.31e-10!123;UBERON:0000073!1.16e-09!94;UBERON:0001016!1.16e-09!94;UBERON:0000369!3.16e-08!4;UBERON:0002435!3.16e-08!4;UBERON:0000204!3.16e-08!4;UBERON:0010082!3.16e-08!4;UBERON:0000200!1.40e-07!6;UBERON:0001871!1.99e-07!7;UBERON:0002420!6.30e-07!9;UBERON:0007245!6.30e-07!9;UBERON:0010009!6.30e-07!9;UBERON:0010011!6.30e-07!9;UBERON:0000454!6.30e-07!9;UBERON:0005383!7.97e-07!3;UBERON:0005382!7.97e-07!3;UBERON:0009663!8.59e-07!7 | |ontology_enrichment_uberon=UBERON:0002780!6.87e-23!41;UBERON:0001890!6.87e-23!41;UBERON:0006240!6.87e-23!41;UBERON:0001893!2.22e-22!34;UBERON:0001869!2.44e-22!32;UBERON:0003080!3.74e-22!42;UBERON:0002791!5.00e-21!33;UBERON:0002020!1.45e-18!34;UBERON:0003528!1.45e-18!34;UBERON:0001049!3.43e-18!57;UBERON:0005068!3.43e-18!57;UBERON:0006241!3.43e-18!57;UBERON:0007135!3.43e-18!57;UBERON:0002619!1.49e-17!22;UBERON:0001950!1.75e-17!20;UBERON:0002616!2.82e-17!59;UBERON:0007023!2.87e-16!115;UBERON:0000955!2.16e-15!69;UBERON:0006238!2.16e-15!69;UBERON:0003056!3.12e-15!61;UBERON:0000956!6.16e-15!25;UBERON:0000203!6.16e-15!25;UBERON:0002346!7.17e-13!90;UBERON:0001017!1.46e-12!82;UBERON:0000153!3.33e-12!129;UBERON:0007811!3.33e-12!129;UBERON:0003075!6.63e-12!86;UBERON:0007284!6.63e-12!86;UBERON:0005743!1.44e-11!86;UBERON:0000033!7.31e-10!123;UBERON:0000073!1.16e-09!94;UBERON:0001016!1.16e-09!94;UBERON:0000369!3.16e-08!4;UBERON:0002435!3.16e-08!4;UBERON:0000204!3.16e-08!4;UBERON:0010082!3.16e-08!4;UBERON:0000200!1.40e-07!6;UBERON:0001871!1.99e-07!7;UBERON:0002420!6.30e-07!9;UBERON:0007245!6.30e-07!9;UBERON:0010009!6.30e-07!9;UBERON:0010011!6.30e-07!9;UBERON:0000454!6.30e-07!9;UBERON:0005383!7.97e-07!3;UBERON:0005382!7.97e-07!3;UBERON:0009663!8.59e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.49e-79;2!UBERON:0005058;3.49e-79;2!UBERON:0009113;3.49e-79;2!UBERON:0004177;1.69e-32;5!UBERON:0005057;1.69e-32;5!UBERON:0001871;5.70e-07;6!UBERON:0000077;7.03e-07;27!UBERON:0002405;7.03e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.49e-79;2!UBERON:0005058;3.49e-79;2!UBERON:0009113;3.49e-79;2!UBERON:0004177;1.69e-32;5!UBERON:0005057;1.69e-32;5!UBERON:0001871;5.70e-07;6!UBERON:0000077;7.03e-07;27!UBERON:0002405;7.03e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.22e-40,4;UBERON:0005058,2.22e-40,4;UBERON:0009113,2.22e-40,4;UBERON:0003295,2.22e-40,4;UBERON:0005562,2.22e-40,4;UBERON:0003351,2.38e-27,6;UBERON:0004177,1.28e-23,7;UBERON:0005057,1.28e-23,7;UBERON:0000974,6.93e-17,10;UBERON:0003408,6.93e-17,10;UBERON:0001042,6.93e-17,10;UBERON:0009145,6.93e-17,10;UBERON:0006562,1.88e-15,11;UBERON:0009722,1.88e-15,11;UBERON:0007690,1.88e-15,11;UBERON:0008814,7.42e-10,18;UBERON:0001557,2.17e-09,19;UBERON:0001871,6.39e-07,6 | |||
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| ||
|short_description=p4@AMN1 | |short_description=p4@AMN1 | ||
}} | }} |
Latest revision as of 03:53, 18 September 2015
Short description: | p4@AMN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AMN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000281471, NM_001113402, NR_004854, uc001rko.3, uc001rkp.3, uc001rkq.3, uc009zjs.2, uc009zjt.1, uc010skc.1_5end |
EntrezGene: | AMN1 |
HGNC: | 27281 |
UniProt: | Q8IY45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 9.91e-41 | 1 |
myotube | 9.91e-41 | 1 |
striated muscle cell | 2.80e-11 | 4 |
skeletal muscle myoblast | 2.80e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.22e-40 | 4 |
hemolymphoid system gland | 2.22e-40 | 4 |
thymic region | 2.22e-40 | 4 |
pharyngeal gland | 2.22e-40 | 4 |
thymus primordium | 2.22e-40 | 4 |
pharyngeal epithelium | 2.38e-27 | 6 |
hemopoietic organ | 1.28e-23 | 7 |
immune organ | 1.28e-23 | 7 |
neck | 6.93e-17 | 10 |
gland of gut | 6.93e-17 | 10 |
chordate pharynx | 6.93e-17 | 10 |
pharyngeal region of foregut | 6.93e-17 | 10 |
pharynx | 1.88e-15 | 11 |
entire pharyngeal arch endoderm | 1.88e-15 | 11 |
early pharyngeal endoderm | 1.88e-15 | 11 |
pharyngeal arch system | 7.42e-10 | 18 |
upper respiratory tract | 2.17e-09 | 19 |
temporal lobe | 6.39e-07 | 6 |