FFCP PHASE1:Hg19::chr11:47207950..47208000,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29763 | |EntrezGene=29763 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8572 | |HGNC=8572 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKS6,E9PEB0,E9PJ33,E9PQ12,E9PIZ6,E9PNM9,E9PIY1 | |UniProt=Q9UKS6,E9PEB0,E9PJ33,E9PQ12,E9PIZ6,E9PNM9,E9PIY1 | ||
|association_with_transcript=0bp_to_ENST00000298838,ENST00000415232,ENST00000524509,ENST00000528201,ENST00000530513,ENST00000531226,ENST00000532457,uc001ndx.2,uc001ndy.2,uc001ndz.2,uc001nea.2_5end | |association_with_transcript=0bp_to_ENST00000298838,ENST00000415232,ENST00000524509,ENST00000528201,ENST00000530513,ENST00000531226,ENST00000532457,uc001ndx.2,uc001ndy.2,uc001ndz.2,uc001nea.2_5end | ||
|cluster_id=chr11:47207950..47208000,- | |||
|description=CAGE_peak_1_at_PACSIN3_5end | |description=CAGE_peak_1_at_PACSIN3_5end | ||
|id=chr11:47207950..47208000,- | |id=chr11:47207950..47208000,- | ||
|ontology_enrichment_celltype=CL:0000066!3.34e-24!254;CL:0000223!9.03e-12!59;CL:0002321!2.02e-11!248;CL:0000220!6.72e-11!246;CL:0002076!2.90e-10!43 | |ontology_enrichment_celltype=CL:0000066!3.34e-24!254;CL:0000223!9.03e-12!59;CL:0002321!2.02e-11!248;CL:0000220!6.72e-11!246;CL:0002076!2.90e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.93e-09;19!CL:0002076;3.89e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.55e-23,253;CL:0000223,3.37e-12,58;CL:0002321,3.74e-11,250;CL:0002076,9.85e-11,42;CL:0000349,7.09e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003104;5.84e-07;31 | |||
|ontology_enrichment_disease=DOID:305!8.03e-09!106;DOID:0050687!3.92e-08!143 | |ontology_enrichment_disease=DOID:305!8.03e-09!106;DOID:0050687!3.92e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.08e-08,106;DOID:0050687,7.74e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.98e-25!347;UBERON:0004119!7.26e-20!169;UBERON:0000925!7.26e-20!169;UBERON:0006595!7.26e-20!169;UBERON:0000475!3.32e-19!365;UBERON:0003104!4.64e-19!238;UBERON:0009142!4.64e-19!238;UBERON:0000468!1.19e-18!659;UBERON:0000064!1.08e-16!219;UBERON:0000922!1.37e-16!612;UBERON:0001007!1.52e-15!155;UBERON:0001555!1.52e-15!155;UBERON:0007026!1.52e-15!155;UBERON:0000062!9.52e-15!511;UBERON:0000923!1.97e-14!604;UBERON:0005291!1.97e-14!604;UBERON:0006598!1.97e-14!604;UBERON:0002532!1.97e-14!604;UBERON:0002050!2.64e-14!605;UBERON:0005423!2.64e-14!605;UBERON:0000467!5.75e-14!625;UBERON:0000480!7.60e-14!626;UBERON:0000077!2.82e-13!130;UBERON:0000119!6.38e-13!312;UBERON:0005177!9.66e-13!107;UBERON:0000483!1.30e-12!309;UBERON:0002100!2.81e-12!216;UBERON:0000466!3.25e-11!126;UBERON:0004921!5.30e-11!129;UBERON:0004185!5.30e-11!129;UBERON:0001048!6.30e-11!168;UBERON:0005256!1.14e-09!143;UBERON:0003103!1.19e-09!69;UBERON:0000477!2.21e-09!286;UBERON:0001041!2.46e-09!98;UBERON:0001004!3.37e-09!72;UBERON:0001444!4.72e-09!48;UBERON:0009569!1.07e-08!113;UBERON:0000464!1.55e-08!104;UBERON:0006554!2.89e-08!44;UBERON:0001008!3.38e-08!45;UBERON:0005631!3.45e-08!14;UBERON:0000158!3.45e-08!14;UBERON:0003102!4.03e-08!95;UBERON:0004121!4.05e-08!169;UBERON:0004111!7.20e-08!241;UBERON:0000924!1.17e-07!173;UBERON:0006601!1.17e-07!173;UBERON:0000161!2.16e-07!35;UBERON:0005911!2.17e-07!82;UBERON:0005172!2.29e-07!55;UBERON:0005173!2.29e-07!55;UBERON:0004923!2.50e-07!57;UBERON:0000478!2.64e-07!24;UBERON:0002365!3.55e-07!31;UBERON:0002330!3.55e-07!31;UBERON:0000063!6.41e-07!97;UBERON:0000165!6.45e-07!28;UBERON:0000930!6.45e-07!28;UBERON:0000166!7.70e-07!21;UBERON:0002417!8.24e-07!61;UBERON:0000916!8.24e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.04e-07;30!UBERON:0001008;2.04e-07;30!UBERON:0000478;3.34e-07;24!UBERON:0002365;5.06e-07;31!UBERON:0002330;5.06e-07;31!UBERON:0000165;6.58e-07;28 | |||
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| ||
|short_description=p1@PACSIN3 | |short_description=p1@PACSIN3 | ||
}} | }} |
Latest revision as of 04:01, 18 September 2015
Short description: | p1@PACSIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PACSIN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000298838, ENST00000415232, ENST00000524509, ENST00000528201, ENST00000530513, ENST00000531226, ENST00000532457, uc001ndx.2, uc001ndy.2, uc001ndz.2, uc001nea.2_5end |
EntrezGene: | PACSIN3 |
HGNC: | 8572 |
UniProt: | Q9UKS6E9PEB0E9PJ33E9PQ12E9PIZ6E9PNM9E9PIY1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.55e-23 | 253 |
endodermal cell | 3.37e-12 | 58 |
embryonic cell | 3.74e-11 | 250 |
endo-epithelial cell | 9.85e-11 | 42 |
extraembryonic cell | 7.09e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.08e-08 | 106 |
cell type cancer | 7.74e-08 | 143 |