FFCP PHASE1:Hg19::chr7:29603394..29603427,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222171 | |EntrezGene=222171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22310 | |HGNC=22310 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV56,A4D1A1 | |UniProt=Q8IV56,A4D1A1 | ||
|association_with_transcript=0bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | |association_with_transcript=0bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | ||
|cluster_id=chr7:29603394..29603427,+ | |||
|description=CAGE_peak_3_at_PRR15_5end | |description=CAGE_peak_3_at_PRR15_5end | ||
|id=chr7:29603394..29603427,+ | |id=chr7:29603394..29603427,+ | ||
|ontology_enrichment_celltype=CL:0000066!7.66e-17!254 | |ontology_enrichment_celltype=CL:0000066!7.66e-17!254 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.53e-10;10!CL:1000494;1.53e-10;10!CL:0000349;9.10e-08;19 | |ontology_enrichment_celltype_v019=CL:1000507;1.53e-10;10!CL:1000494;1.53e-10;10!CL:0000349;9.10e-08;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.28e-15,253;CL:1000507,1.83e-10,10;CL:1000494,1.83e-10,10;CL:0000349,8.58e-08,19 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.03e-14!106;DOID:0050687!1.12e-09!143;DOID:299!1.84e-08!25 | |ontology_enrichment_disease=DOID:305!1.03e-14!106;DOID:0050687!1.12e-09!143;DOID:299!1.84e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:299;1.44e-13;25 | |ontology_enrichment_disease_v019=DOID:299;1.44e-13;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,6.68e-17,106;DOID:299,7.84e-14,25;DOID:0050687,1.39e-12,143 | |||
|ontology_enrichment_uberon=UBERON:0000466!3.01e-12!126;UBERON:0004119!1.05e-10!169;UBERON:0000925!1.05e-10!169;UBERON:0006595!1.05e-10!169;UBERON:0003886!1.36e-09!63;UBERON:0000464!1.52e-09!104;UBERON:0002553!1.62e-09!70;UBERON:0004921!3.69e-09!129;UBERON:0004185!3.69e-09!129;UBERON:0005631!1.28e-08!14;UBERON:0000158!1.28e-08!14;UBERON:0001007!1.74e-08!155;UBERON:0001555!1.74e-08!155;UBERON:0007026!1.74e-08!155;UBERON:0000481!8.65e-08!347;UBERON:0000077!8.91e-08!130;UBERON:0001048!9.88e-08!168;UBERON:0002323!1.41e-07!46;UBERON:0000064!2.22e-07!219;UBERON:0009569!3.57e-07!113;UBERON:0005177!6.00e-07!107;UBERON:0002100!8.70e-07!216 | |ontology_enrichment_uberon=UBERON:0000466!3.01e-12!126;UBERON:0004119!1.05e-10!169;UBERON:0000925!1.05e-10!169;UBERON:0006595!1.05e-10!169;UBERON:0003886!1.36e-09!63;UBERON:0000464!1.52e-09!104;UBERON:0002553!1.62e-09!70;UBERON:0004921!3.69e-09!129;UBERON:0004185!3.69e-09!129;UBERON:0005631!1.28e-08!14;UBERON:0000158!1.28e-08!14;UBERON:0001007!1.74e-08!155;UBERON:0001555!1.74e-08!155;UBERON:0007026!1.74e-08!155;UBERON:0000481!8.65e-08!347;UBERON:0000077!8.91e-08!130;UBERON:0001048!9.88e-08!168;UBERON:0002323!1.41e-07!46;UBERON:0000064!2.22e-07!219;UBERON:0009569!3.57e-07!113;UBERON:0005177!6.00e-07!107;UBERON:0002100!8.70e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.53e-10;10!UBERON:0009773;1.53e-10;10!UBERON:0001231;1.53e-10;10!UBERON:0004810;1.53e-10;10!UBERON:0005631;3.27e-08;10!UBERON:0000158;3.27e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0004211;1.53e-10;10!UBERON:0009773;1.53e-10;10!UBERON:0001231;1.53e-10;10!UBERON:0004810;1.53e-10;10!UBERON:0005631;3.27e-08;10!UBERON:0000158;3.27e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.27e-12,14;UBERON:0000158,3.27e-12,14;UBERON:0004810,1.83e-10,10;UBERON:0002100,5.35e-10,199;UBERON:0009569,3.18e-09,112;UBERON:0003124,3.49e-09,7;UBERON:0005177,5.93e-09,101;UBERON:0001008,7.38e-09,48;UBERON:0002417,7.90e-09,60;UBERON:0000916,7.90e-09,60;UBERON:0006554,2.00e-08,47;UBERON:0005172,2.08e-07,54;UBERON:0005173,2.08e-07,54;UBERON:0006555,9.42e-07,16;UBERON:0004819,9.42e-07,16 | |||
|phase1_expression=2.72517568905835,0.642301571672949,2.39622486963151,2.00146596706261,0.446961094427288,1.74467704820074,0,0.631719873426831,0,0.245733936501509,0,4.36882744260345,4.74780560811216,0,0,0,0,0,0,0,0.204000691244253,0,0,0.410623275218653,0,0,0,0,0,0,0.154816123316076,0,0,1.10926203050036,0,0,2.34880351467878,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58015173161885,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.654895377488563,0.364295288292542,0.741568885568859,0,0,0.398873881556595,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0,1.04497483268405,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0,0,0,0,1.49091585508596,0.759783069987479,0,0.860509862246441,0,1.12135520028461,1.06748995729705,0.74000264525148,1.8672662123986,1.88594940897563,1.14423332179421,1.21085942115945,2.30470369792,0.468642863667593,0,0.570471821544449,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0,4.55080680969013,7.18618141816238,0,0,0,0,0,0,1.36118619792025,0,0,0.423863802319124,0,0,0.257640540045629,0.558350568994769,0.168776332241266,0.292311015483596,0,0,0,0,0,0,1.73934767846967,0.272746120590835,0.286804595389004,3.78118489001746,1.85541675650079,2.32387885739037,1.34759371519982,1.7662459561294,2.18986415445498,0,0,0,0,0,0.709840800239063,1.01150814046861,1.20505514941741,0.110293972732394,1.30727666455444,0.71181185733329,0.404493924480493,0.196221465125346,0.38474715694639,0,1.40241773803446,2.8810180793198,2.94017422771084,0,0.982827216677626,0,0,2.95172252503473,1.20097467208968,0.548751427043128,3.37205259772859,1.20634766893957,0.0925884451585296,0.977424915930974,0,0,0.34779121492523,1.99594780200897,0.288732895522148,0,0,3.95102198979638,2.57545848628462,0,0,0,0.93733833986777,0,0,0.53735113621709,0.871901815541886,1.15014803749563,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.87192013766656,0,1.68053230485111,0,0,0.531876233169741,0,0,0,0,1.00084595560703,0,0,0,0.710783897485092,0.791951872933429,0.602878754119172,0,0.799783929456456,0,0,0,0,0,0,1.01346914667305,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.178428988797162,0.788512075169673,0.234282829985426,0.601892199455438,6.82222512167955,0,0,0,0,0,0,0,0,0,7.57818928615649,3.32870879020994,3.0239029332968,3.2254015016441,0.61384789315225,2.24528075546459,2.17836553734692,2.04682899626681,0.64341568457443,4.45254199334973,0.308419387605311,0.710246901252508,0.0821271560138091,0,0,1.93375119346596,0.40101294060657,3.77532054637175,0,0,0,6.31679458070376,4.92898157468254,2.35304930753057,1.46139224653261,3.27210049567915,0,0,0,0,1.08378575017541,2.50844886927427,6.88165937221603,8.31076008928724,1.56712328305525,0.219259876645935,0,2.56450125116389,1.96808787419823,0.325378394664303,1.44257416306811,0.0915694648183434,0,0,0,4.82051789532479,0.193341436584244,0,0,0.137836572484531,0,0,0.0852266274161009,0.267096106940212,0.330569830721956,0.192190067365106,0.127612712494584,2.2254711788221,0.464845549297286,0,0,0.308033580176089,1.06461206063404,0,0.55597265731176,1.5743737541619,0.372158369359667,1.58189712359363,1.5250415513906,1.27948895655667,0,0.318203247925937,0,0,0.54907405947211,0.471249609382746,1.41527737101321,0,0,0,0,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,2.02910376962704,0,1.69017361519345,0.286822704408103,0.196498082026242,1.78335525740625,0,0,0,0.379473173765715,2.79947776195986,0.865999014529609,1.34060455107157,0,0.659006605437454,0.43050537267123,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.96032172784825,0,0,0,1.4348364545594,0,0.191505370132367,0,0,1.96558024679421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4155729649014,0.146508179271894,0,0,0,12.4147132063599,3.26661148915902,16.8938386154578,0,0.422008249231538,0,0,0,0.796991953004279,0.276283915531148,0.251932747854276,0,0,0,1.07842021376792,6.26574111364632,0,0.887790650732402,0,0,0,0.185536196323703,0,2.60427761085233,8.74599999961957,0,3.41380344856499,0,2.36387681767936,3.10269035917318,0,0,0,0,0,0.221158519862449,0,0.658156191461918,0,3.62501735124369,0.846452843541768,0,1.1528195219403,2.42345639906385,2.28159481036217,7.65602783356607,3.84709892287822,5.86338253620498,0,0,0.332423363800313,0,0,0,0,0,3.37596903244843,3.59112177950125,2.82706142867882,0,1.99052386215701,3.53830258013357,5.49927130440263,0,0,0,0.539209063845416,0,0,0,4.69595085437015,0,0.789168805698781,1.20990716048664,0.30607276163049,0.189559738885464,0.300646838828985,1.14057010536972,5.98188485436467,0.661983911750998,2.82539626566503,4.77889719091835,4.26914319044689,0,3.64475450503775,0,0.522355239482415,2.09672001890436,0.171986032471617,0.483781656445426,0.877071805034227,0.739039113478883,0.193978032976839,0,1.12990370390266,0,0,0.316553979779393,4.69323318563527,1.04206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| ||
|short_description=p3@PRR15 | |short_description=p3@PRR15 | ||
}} | }} |
Latest revision as of 04:29, 18 September 2015
Short description: | p3@PRR15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRR15_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319694, NM_175887, uc003tac.1_5end |
EntrezGene: | PRR15 |
HGNC: | 22310 |
UniProt: | Q8IV56A4D1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.28e-15 | 253 |
kidney tubule cell | 1.83e-10 | 10 |
nephron tubule epithelial cell | 1.83e-10 | 10 |
extraembryonic cell | 8.58e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.27e-12 | 14 |
membranous layer | 3.27e-12 | 14 |
nephron tubule epithelium | 1.83e-10 | 10 |
trunk | 5.35e-10 | 199 |
subdivision of trunk | 3.18e-09 | 112 |
chorion | 3.49e-09 | 7 |
trunk region element | 5.93e-09 | 101 |
renal system | 7.38e-09 | 48 |
abdominal segment of trunk | 7.90e-09 | 60 |
abdomen | 7.90e-09 | 60 |
urinary system structure | 2.00e-08 | 47 |
abdomen element | 2.08e-07 | 54 |
abdominal segment element | 2.08e-07 | 54 |
excretory tube | 9.42e-07 | 16 |
kidney epithelium | 9.42e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.68e-17 | 106 |
adenocarcinoma | 7.84e-14 | 25 |
cell type cancer | 1.39e-12 | 143 |