FFCP PHASE1:Hg19::chr7:29603552..29603566,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:29603552..29603566,+
|short_description=p5@PRR15
|description=CAGE_peak_5_at_PRR15_5end
|association_with_transcript=125bp_to_ENST00000319694,NM_175887,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=222171 | |EntrezGene=222171 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22310 | |HGNC=22310 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV56,A4D1A1 | |UniProt=Q8IV56,A4D1A1 | ||
|association_with_transcript=125bp_to_ENST00000319694,NM_175887,uc003tac.1_5end | |||
|cluster_id=chr7:29603552..29603566,+ | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_5_at_PRR15_5end | |||
|id=chr7:29603552..29603566,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.64e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.77e-15;19!CL:0002577;3.71e-13;3!CL:0002541;5.80e-12;3!CL:0002536;2.00e-09;2!CL:0002554;2.25e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.55e-15,19;CL:0002577,3.52e-13,3;CL:0002541,1.21e-11,3;CL:0002536,2.01e-09,2;CL:0002554,2.26e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.38e-13!106;DOID:299!1.25e-09!25;DOID:0050687!2.55e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.60e-11!14;UBERON:0000158!2.60e-11!14;UBERON:0003124!5.12e-09!7;UBERON:0004119!1.14e-07!169;UBERON:0000925!1.14e-07!169;UBERON:0006595!1.14e-07!169;UBERON:0000466!1.59e-07!126;UBERON:0000077!2.95e-07!130;UBERON:0004921!8.13e-07!129;UBERON:0004185!8.13e-07!129;UBERON:0000478!9.52e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.13e-13;10!UBERON:0000158;1.13e-13;10!UBERON:0003124;5.80e-12;3!UBERON:0000920;5.80e-12;3!UBERON:0000478;6.90e-12;24!UBERON:0001987;5.75e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.03e-21,14;UBERON:0000158,2.03e-21,14;UBERON:0003124,1.16e-19,7;UBERON:0000478,9.15e-12,24;UBERON:0000920,1.21e-11,3;UBERON:0001987,5.54e-10,4;UBERON:0004340,5.54e-10,4;UBERON:0004871,3.44e-08,8 | |||
|phase1_expression=0.726713517082227,0,0.422863212287913,1.0007329835313,0,0.872338524100369,2.53299878168311,0,0,0,0,5.46103430325431,6.33040747748289,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9408389224012,0,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0,0,0,1.68203280042692,0,0.49333509683432,0.311211035399766,1.88594940897563,1.9615428373615,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,4.55080680969013,6.46756327634615,0,0,0,0,0,0,1.92834711372036,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,1.2347220339942,2.94017422771084,0,0,0,0,0.245976877086227,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,1.99594780200897,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0.355391948742546,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,5.75942385747893,4.99306318531491,5.44302527993425,0.744323423456331,0.153461973288062,0,0.256278298511402,0,0,1.48418066444991,0.462629081407967,0.532685175939381,0.0821271560138091,0,0,0.846016147141356,0,0,0,0,0,1.35359883872224,0.308061348417659,1.56869953835371,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,0.429374660225974,0,0,0.571890581771475,0.767693373934002,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.608731130888112,0,0.563391205064483,0,0,0.7133421029625,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,2.14870036263921,0.593929361665277,0.614321404198464,0,0,0,0,0,1.39473591775749,0.828851746593443,0,0,0,0,0.269605053441981,1.07412704805365,0,0.295930216910801,0,0,0,0,0,0.7812832832557,3.84823999983261,0,0.796554137998498,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.692552326534174,0,0,0.0897576444097721,0,1.27600463892768,1.00757352742049,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.141353071433941,0,1.99052386215701,0.530745387020035,0,0,0,0,0,0.802577647298789,0,0,0.586993856796269,0,0.789168805698781,1.20990716048664,0,0.063186579628488,0,0,0.664653872707185,0,0,0,1.42304773014896,0,0.694238953340524,0,0,2.27144668714639,0.171986032471617,0,0,0,0,0,0,0,0,0,1.95551382734803,0.160317640503067,0.640358984218058,0.19980960958213,3.45817001169854,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,1.16495949527454,0.236349546921671,0.0824158583811665,0,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0.945668487590378,0,0.211200673038813,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,2.11444506695002,0.533937062838473,0.157204305099666,1.24271716604159,0.496166021811951,0.197611631897944,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0.796191777397232,0,0,0,0,0.57785949122191,1.28664954824955,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,1.90802610392051,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.392590874004102,0.471878893390961,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0.601682626794058,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0,1.21393120847326,0,0.887023701626388,0,0,0,0,0.236387681767936,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.559277158988962,0.490751168076215,3.04794812455674,0,0,0,0,0.467878926924211,0.198950775161368,0,2.14597555874024,0,0.603851374266694,0.463044948647668,0.437119121007915,1.41095188908457,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0.327796715891087,0,0.203977659483963,0.2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| |phase1_expression=0.726713517082227,0,0.422863212287913,1.0007329835313,0,0.872338524100369,2.53299878168311,0,0,0,0,5.46103430325431,6.33040747748289,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9408389224012,0,0,0,0,0,0,0.221729397462564,0,0.327447688744282,0.364295288292542,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,0,0,0,1.68203280042692,0,0.49333509683432,0.311211035399766,1.88594940897563,1.9615428373615,0.908144565869588,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,4.55080680969013,6.46756327634615,0,0,0,0,0,0,1.92834711372036,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,1.2347220339942,2.94017422771084,0,0,0,0,0.245976877086227,0.514703430895577,0,0,0.100528972411631,0,0,0,0,0,1.99594780200897,0,0,0,0.790204397959275,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.857867961948885,0,0,0,0.355391948742546,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,5.75942385747893,4.99306318531491,5.44302527993425,0.744323423456331,0.153461973288062,0,0.256278298511402,0,0,1.48418066444991,0.462629081407967,0.532685175939381,0.0821271560138091,0,0,0.846016147141356,0,0,0,0,0,1.35359883872224,0.308061348417659,1.56869953835371,0,0,0,0,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,0.429374660225974,0,0,0.571890581771475,0.767693373934002,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.608731130888112,0,0.563391205064483,0,0,0.7133421029625,0,0.211107635297664,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61996756571508,0,0,0,0,2.14870036263921,0.593929361665277,0.614321404198464,0,0,0,0,0,1.39473591775749,0.828851746593443,0,0,0,0,0.269605053441981,1.07412704805365,0,0.295930216910801,0,0,0,0,0,0.7812832832557,3.84823999983261,0,0.796554137998498,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.692552326534174,0,0,0.0897576444097721,0,1.27600463892768,1.00757352742049,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.141353071433941,0,1.99052386215701,0.530745387020035,0,0,0,0,0,0.802577647298789,0,0,0.586993856796269,0,0.789168805698781,1.20990716048664,0,0.063186579628488,0,0,0.664653872707185,0,0,0,1.42304773014896,0,0.694238953340524,0,0,2.27144668714639,0.171986032471617,0,0,0,0,0,0,0,0,0,1.95551382734803,0.160317640503067,0.640358984218058,0.19980960958213,3.45817001169854,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0.360299883542404,1.16495949527454,0.236349546921671,0.0824158583811665,0,0,0,0,0,0.160753148465019,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0.945668487590378,0,0.211200673038813,0,1.53532157855556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,2.11444506695002,0.533937062838473,0.157204305099666,1.24271716604159,0.496166021811951,0.197611631897944,0,0,0,0,0,0,1.57054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0.251567901752575,0,0.228840068396924,0.302461847526478,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0.796191777397232,0,0,0,0,0.57785949122191,1.28664954824955,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,1.90802610392051,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.392590874004102,0.471878893390961,0.183428598521679,0.115525666150338,0,0.690359926060101,0,0.601682626794058,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.255524855279191,0.535701835878287,0,1.21393120847326,0,0.887023701626388,0,0,0,0,0.236387681767936,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.559277158988962,0.490751168076215,3.04794812455674,0,0,0,0,0.467878926924211,0.198950775161368,0,2.14597555874024,0,0.603851374266694,0.463044948647668,0.437119121007915,1.41095188908457,0,0,0,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0.432626562123789,0,0.327796715891087,0,0.203977659483963,0.2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| ||
|short_description=p5@PRR15 | |||
}} | }} |
Latest revision as of 04:33, 18 September 2015
Short description: | p5@PRR15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRR15_5end |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | 125bp_to_ENST00000319694, NM_175887, uc003tac.1_5end |
EntrezGene: | PRR15 |
HGNC: | 22310 |
UniProt: | Q8IV56A4D1A1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.55e-15 | 19 |
placental epithelial cell | 3.52e-13 | 3 |
chorionic membrane mesenchymal stem cell | 1.21e-11 | 3 |
amniotic epithelial cell | 2.01e-09 | 2 |
fibroblast of lymphatic vessel | 2.26e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.03e-21 | 14 |
membranous layer | 2.03e-21 | 14 |
chorion | 1.16e-19 | 7 |
extraembryonic structure | 9.15e-12 | 24 |
egg chorion | 1.21e-11 | 3 |
placenta | 5.54e-10 | 4 |
allantois | 5.54e-10 | 4 |
somatic layer of lateral plate mesoderm | 3.44e-08 | 8 |