FFCP PHASE1:Hg19::chr13:93372254..93372268,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39886 | |HGNC=39886 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-26bp_to_ENST00000451897_5end | |association_with_transcript=-26bp_to_ENST00000451897_5end | ||
|cluster_id=chr13:93372254..93372268,- | |||
|coexpression_cluster_id=C94 | |coexpression_cluster_id=C94 | ||
|description=CAGE_peak_2_at_GPC5-AS1_5end | |description=CAGE_peak_2_at_GPC5-AS1_5end | ||
|id=chr13:93372254..93372268,- | |id=chr13:93372254..93372268,- | ||
|ontology_enrichment_celltype=CL:0000167!8.54e-08!1;CL:0000164!8.54e-08!1;CL:0000502!8.54e-08!1;CL:0000172!8.54e-08!1;CL:0000173!8.54e-08!1;CL:0002351!8.54e-08!1 | |ontology_enrichment_celltype=CL:0000167!8.54e-08!1;CL:0000164!8.54e-08!1;CL:0000502!8.54e-08!1;CL:0000172!8.54e-08!1;CL:0000173!8.54e-08!1;CL:0002351!8.54e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000167;8.34e-34;1!CL:0000164;8.34e-34;1!CL:0000502;8.34e-34;1!CL:0000172;8.34e-34;1!CL:0000173;8.34e-34;1!CL:0000138;7.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.06e-34,1;CL:0000164,7.06e-34,1;CL:0000502,7.06e-34,1;CL:0000172,7.06e-34,1;CL:0000173,7.06e-34,1;CL:0002351,7.06e-34,1;CL:0000058,7.58e-07,6;CL:0000138,7.58e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;8.34e-34;1 | |||
|ontology_enrichment_disease=DOID:3371!7.03e-08!1;DOID:4549!7.03e-08!1;DOID:5861!7.03e-08!1;DOID:6496!7.03e-08!1;DOID:4430!8.54e-08!1 | |ontology_enrichment_disease=DOID:3371!7.03e-08!1;DOID:4549!7.03e-08!1;DOID:5861!7.03e-08!1;DOID:6496!7.03e-08!1;DOID:4430!8.54e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:3371;3.05e-34;1!DOID:4549;3.05e-34;1!DOID:5861;3.05e-34;1!DOID:6496;3.05e-34;1!DOID:4430;8.34e-34;1!DOID:3119;1.61e-10;14!DOID:201;7.80e-07;6!DOID:0060100;7.80e-07;6!DOID:169;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.58e-34,1;DOID:4549,2.58e-34,1;DOID:5861,2.58e-34,1;DOID:6496,2.58e-34,1;DOID:4430,7.06e-34,1;DOID:3119,1.64e-10,14;DOID:201,7.58e-07,6;DOID:0060100,7.58e-07,6;DOID:169,8.97e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000341;9.07e-18;2!UBERON:0002418;2.19e-12;3!UBERON:0004755;2.19e-12;3!UBERON:0002114;3.06e-12;2!UBERON:0002108;7.25e-08;4!UBERON:0000974;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,9.07e-18,2;UBERON:0002418,2.07e-12,3;UBERON:0004755,2.07e-12,3;UBERON:0002114,3.24e-12,2;UBERON:0002108,7.49e-08,4 | |||
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|short_description=p2@GPC5-AS1 | |short_description=p2@GPC5-AS1 | ||
}} | }} |
Latest revision as of 04:45, 18 September 2015
Short description: | p2@GPC5-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPC5-AS1_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | -26bp_to_ENST00000451897_5end |
EntrezGene: | NA |
HGNC: | 39886 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.06e-34 | 1 |
enteroendocrine cell | 7.06e-34 | 1 |
type D enteroendocrine cell | 7.06e-34 | 1 |
somatostatin secreting cell | 7.06e-34 | 1 |
pancreatic D cell | 7.06e-34 | 1 |
progenitor cell of endocrine pancreas | 7.06e-34 | 1 |
chondroblast | 7.58e-07 | 6 |
chondrocyte | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
throat | 9.07e-18 | 2 |
cartilage tissue | 2.07e-12 | 3 |
skeletal tissue | 2.07e-12 | 3 |
duodenum | 3.24e-12 | 2 |
small intestine | 7.49e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.58e-34 | 1 |
extraosseous chondrosarcoma | 2.58e-34 | 1 |
myxoid chondrosarcoma | 2.58e-34 | 1 |
extraskeletal myxoid chondrosarcoma | 2.58e-34 | 1 |
somatostatinoma | 7.06e-34 | 1 |
gastrointestinal system cancer | 1.64e-10 | 14 |
connective tissue cancer | 7.58e-07 | 6 |
musculoskeletal system cancer | 7.58e-07 | 6 |
neuroendocrine tumor | 8.97e-07 | 6 |