FFCP PHASE1:Hg19::chr21:34921788..34921825,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:34921788..34921825,+ to FFCP PHASE1:Hg19::chr21:34921788..34921825,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6651 | |EntrezGene=6651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11183 | |HGNC=11183 | ||
|TSSclassifier=strong | |||
|UniProt=B3KRA1 | |UniProt=B3KRA1 | ||
|association_with_transcript=-76bp_to_AK091233,AX746865_5end | |||
|cluster_id=chr21:34921788..34921825,+ | |||
|description=CAGE_peak_2_at_SON_5end | |||
|id=chr21:34921788..34921825,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.26e-08!42;CL:0000860!1.41e-08!45;CL:0002087!2.65e-08!119;CL:0000738!6.42e-07!140;CL:0002031!7.03e-07!124;CL:0002032!9.32e-07!165;CL:0000837!9.32e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-10;33!CL:0002057;1.49e-10;33!CL:0000473;3.74e-08;39!CL:0000234;3.74e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.21e-09,42;CL:0002057,6.21e-09,42;CL:0000473,2.64e-08,48;CL:0000234,2.64e-08,48;CL:0002087,3.01e-08,115;CL:0000738,4.82e-07,136;CL:0002032,7.41e-07,161;CL:0000837,7.41e-07,161;CL:0002031,8.40e-07,120;CL:0000037,9.39e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.54e-07;42 | |||
|ontology_enrichment_disease=DOID:162!5.21e-08!235;DOID:14566!5.71e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.57e-07,235;DOID:14566,1.70e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.39e-09!57;UBERON:0005068!2.39e-09!57;UBERON:0006241!2.39e-09!57;UBERON:0007135!2.39e-09!57;UBERON:0002780!6.87e-09!41;UBERON:0001890!6.87e-09!41;UBERON:0006240!6.87e-09!41;UBERON:0003080!1.12e-08!42;UBERON:0001017!1.30e-08!82;UBERON:0000073!3.63e-08!94;UBERON:0001016!3.63e-08!94;UBERON:0005743!7.28e-08!86;UBERON:0002020!8.66e-08!34;UBERON:0003528!8.66e-08!34;UBERON:0002791!6.13e-07!33;UBERON:0000955!8.34e-07!69;UBERON:0006238!8.34e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;8.96e-07;41!UBERON:0001890;8.96e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.32e-09,56;UBERON:0005068,2.32e-09,56;UBERON:0006241,2.32e-09,56;UBERON:0007135,2.32e-09,56;UBERON:0002780,1.09e-08,41;UBERON:0001890,1.09e-08,41;UBERON:0003080,1.09e-08,41;UBERON:0006240,1.09e-08,41;UBERON:0001016,2.08e-08,89;UBERON:0001017,2.90e-08,81;UBERON:0000073,3.73e-08,53;UBERON:0002616,3.73e-08,53;UBERON:0003528,1.51e-07,34;UBERON:0002020,1.51e-07,34;UBERON:0002791,6.63e-07,32 | |||
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| ||
|short_description=p2@SON | |||
}} | }} |
Latest revision as of 04:50, 18 September 2015
Short description: | p2@SON |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SON_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_AK091233, AX746865_5end |
EntrezGene: | SON |
HGNC: | 11183 |
UniProt: | B3KRA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.21e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.21e-09 | 42 |
defensive cell | 2.64e-08 | 48 |
phagocyte | 2.64e-08 | 48 |
nongranular leukocyte | 3.01e-08 | 115 |
leukocyte | 4.82e-07 | 136 |
hematopoietic oligopotent progenitor cell | 7.41e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 8.40e-07 | 120 |
hematopoietic stem cell | 9.39e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.32e-09 | 56 |
neural rod | 2.32e-09 | 56 |
future spinal cord | 2.32e-09 | 56 |
neural keel | 2.32e-09 | 56 |
regional part of forebrain | 1.09e-08 | 41 |
forebrain | 1.09e-08 | 41 |
anterior neural tube | 1.09e-08 | 41 |
future forebrain | 1.09e-08 | 41 |
nervous system | 2.08e-08 | 89 |
central nervous system | 2.90e-08 | 81 |
regional part of nervous system | 3.73e-08 | 53 |
regional part of brain | 3.73e-08 | 53 |
brain grey matter | 1.51e-07 | 34 |
gray matter | 1.51e-07 | 34 |
regional part of telencephalon | 6.63e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.57e-07 | 235 |
disease of cellular proliferation | 1.70e-07 | 239 |