FFCP PHASE1:Hg19::chr13:93879252..93879253,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4454 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y625 | |||
|association_with_transcript=157bp_to_ENST00000377047_5end | |||
|cluster_id=chr13:93879252..93879253,+ | |||
|description=CAGE_peak_19_at_GPC6_5end | |||
|id=chr13:93879252..93879253,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.88e-11!180;CL:0000667!3.69e-08!6;CL:0000058!3.69e-08!6;CL:0000138!3.69e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.07e-34;6!CL:0000153;5.13e-23;9!CL:0000447;5.13e-23;9!CL:0000327;2.75e-14;15!CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0000499;3.78e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,8.35e-34,6;CL:0000138,8.35e-34,6;CL:0000153,5.74e-23,9;CL:0000447,5.74e-23,9;CL:0000327,2.94e-14,15;CL:1000306,1.13e-13,4;CL:0002547,1.13e-13,4;CL:0000499,3.92e-08,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.46e-50;1!DOID:4549;1.46e-50;1!DOID:5861;1.46e-50;1!DOID:6496;1.46e-50;1!DOID:201;1.22e-09;6!DOID:0060100;1.22e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.46e-50,1;DOID:4549,1.46e-50,1;DOID:5861,1.46e-50,1;DOID:6496,1.46e-50,1;DOID:201,1.22e-09,6;DOID:0060100,1.22e-09,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.76e-18;3!UBERON:0004755;6.76e-18;3!UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.76e-18,3;UBERON:0004755,6.76e-18,3;UBERON:0000415,1.13e-13,4;UBERON:0007240,1.13e-13,4;UBERON:0005742,1.13e-13,4;UBERON:0005734,1.13e-13,4;UBERON:0004664,1.13e-13,4;UBERON:0004663,1.13e-13,4;UBERON:0004797,2.18e-08,7 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.00267582127178,0.289693037921647,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,1.14734648299525,0,0.560677600142307,0,0.74000264525148,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0.482561763430822,0,0,0.355123450626254,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.445160178233687,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0.583209226766509,0.173624994933292,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0.91153644677601,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,3.79501344773451,0.451961481561065,0.274083849293502,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0.686379991447858,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.477890301491107,0,0.155262956876259,0,0,0,0.751288044986092,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0,0,0,0.918736432059601,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0.150962843566674,0,0.218559560503957,0,0,0.235676547101626,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@GPC6 | |||
}} |
Latest revision as of 04:56, 18 September 2015
Short description: | p19@GPC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_GPC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 157bp_to_ENST00000377047_5end |
EntrezGene: | GPC6 |
HGNC: | 4454 |
UniProt: | Q9Y625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 8.35e-34 | 6 |
chondrocyte | 8.35e-34 | 6 |
GAG secreting cell | 5.74e-23 | 9 |
carbohydrate secreting cell | 5.74e-23 | 9 |
extracellular matrix secreting cell | 2.94e-14 | 15 |
fibroblast of tunica adventitia of artery | 1.13e-13 | 4 |
fibroblast of the aortic adventitia | 1.13e-13 | 4 |
stromal cell | 3.92e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.76e-18 | 3 |
skeletal tissue | 6.76e-18 | 3 |
artery wall | 1.13e-13 | 4 |
tunica adventitia of artery | 1.13e-13 | 4 |
adventitia | 1.13e-13 | 4 |
tunica adventitia of blood vessel | 1.13e-13 | 4 |
aorta tunica adventitia | 1.13e-13 | 4 |
aorta wall | 1.13e-13 | 4 |
blood vessel layer | 2.18e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.46e-50 | 1 |
extraosseous chondrosarcoma | 1.46e-50 | 1 |
myxoid chondrosarcoma | 1.46e-50 | 1 |
extraskeletal myxoid chondrosarcoma | 1.46e-50 | 1 |
connective tissue cancer | 1.22e-09 | 6 |
musculoskeletal system cancer | 1.22e-09 | 6 |