FFCP PHASE1:Hg19::chr10:43892175..43892263,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:43892175..43892263,- to FFCP PHASE1:Hg19::chr10:43892175..43892263,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3185 | |EntrezGene=3185 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5039 | |HGNC=5039 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000498176_5end | |||
|cluster_id=chr10:43892175..43892263,- | |||
|description=CAGE_peak_4_at_HNRNPF_5end | |||
|id=chr10:43892175..43892263,- | |||
|ontology_enrichment_celltype=CL:0000066!3.28e-11!254;CL:0002319!1.75e-09!25;CL:1000449!1.24e-07!16;CL:0000133!2.02e-07!59;CL:1000497!3.41e-07!18;CL:0002518!3.41e-07!18;CL:0000333!5.31e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.56e-09;25!CL:1000449;9.86e-08;15!CL:1000497;3.33e-07;17!CL:0002518;3.33e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.91e-11,253;CL:0002319,1.75e-09,25;CL:1000449,1.07e-07,15;CL:0000133,2.02e-07,59;CL:1000497,3.21e-07,17;CL:0002518,3.21e-07,17;CL:0000333,5.30e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.69e-14!235;DOID:14566!1.77e-14!239;DOID:0050687!4.22e-09!143;DOID:0050686!4.12e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.44e-14,235;DOID:14566,1.51e-14,239;DOID:0050687,3.77e-09,143;DOID:0050686,3.67e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004211!1.24e-07!16;UBERON:0001285!1.24e-07!16;UBERON:0007684!1.24e-07!16;UBERON:0003220!1.24e-07!16;UBERON:0004208!1.24e-07!16;UBERON:0006555!2.27e-07!17;UBERON:0005103!2.27e-07!17;UBERON:0000083!2.27e-07!17;UBERON:0009201!2.27e-07!17;UBERON:0004819!2.27e-07!17;UBERON:0006553!2.27e-07!17;UBERON:0003074!2.27e-07!17;UBERON:0003060!2.27e-07!17;UBERON:0000080!3.02e-07!18;UBERON:0002120!3.02e-07!18;UBERON:0004875!3.02e-07!18;UBERON:0005721!3.02e-07!18;UBERON:0005754!3.02e-07!18;UBERON:0007297!3.02e-07!18;UBERON:0000058!3.54e-07!26;UBERON:0005172!4.08e-07!55;UBERON:0005173!4.08e-07!55;UBERON:0000353!4.64e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.86e-08;15!UBERON:0004819;9.86e-08;15!UBERON:0001285;9.86e-08;15!UBERON:0007684;9.86e-08;15!UBERON:0000353;1.49e-07;15!UBERON:0000922;1.86e-07;49!UBERON:0001851;9.48e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.07e-07,15;UBERON:0009773,1.07e-07,15;UBERON:0001231,1.07e-07,15;UBERON:0001285,1.07e-07,15;UBERON:0007684,1.07e-07,15;UBERON:0004208,1.07e-07,15;UBERON:0000353,1.66e-07,15;UBERON:0006555,2.06e-07,16;UBERON:0004819,2.06e-07,16;UBERON:0005172,4.66e-07,54;UBERON:0005173,4.66e-07,54 | |||
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| ||
|short_description=p4@HNRNPF | |||
}} | }} |
Latest revision as of 06:13, 18 September 2015
Short description: | p4@HNRNPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HNRNPF_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000498176_5end |
EntrezGene: | HNRNPF |
HGNC: | 5039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.91e-11 | 253 |
neural cell | 1.75e-09 | 25 |
epithelial cell of nephron | 1.07e-07 | 15 |
neurectodermal cell | 2.02e-07 | 59 |
kidney cell | 3.21e-07 | 17 |
kidney epithelial cell | 3.21e-07 | 17 |
migratory neural crest cell | 5.30e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.07e-07 | 15 |
renal tubule | 1.07e-07 | 15 |
nephron tubule | 1.07e-07 | 15 |
nephron | 1.07e-07 | 15 |
uriniferous tubule | 1.07e-07 | 15 |
nephrogenic mesenchyme | 1.07e-07 | 15 |
parenchyma | 1.66e-07 | 15 |
excretory tube | 2.06e-07 | 16 |
kidney epithelium | 2.06e-07 | 16 |
abdomen element | 4.66e-07 | 54 |
abdominal segment element | 4.66e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.44e-14 | 235 |
disease of cellular proliferation | 1.51e-14 | 239 |
cell type cancer | 3.77e-09 | 143 |
organ system cancer | 3.67e-07 | 137 |