FFCP PHASE1:Hg19::chr16:85936488..85936492,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3394 | |EntrezGene=3394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5358 | |HGNC=5358 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=170bp_to_uc002fji.2_5end | |association_with_transcript=170bp_to_uc002fji.2_5end | ||
|cluster_id=chr16:85936488..85936492,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_10_at_IRF8_5end | |description=CAGE_peak_10_at_IRF8_5end | ||
|id=chr16:85936488..85936492,+ | |id=chr16:85936488..85936492,+ | ||
|ontology_enrichment_celltype=CL:0000945!2.14e-57!24;CL:0000826!2.14e-57!24;CL:0000838!1.65e-28!52;CL:0000542!6.56e-28!53;CL:0000051!6.56e-28!53;CL:0000784!2.37e-21!3;CL:0000738!4.97e-20!140;CL:0002087!1.30e-17!119;CL:0000037!3.84e-17!172;CL:0000566!3.84e-17!172;CL:0000236!1.25e-16!14;CL:0000988!5.99e-16!182;CL:0002031!6.46e-15!124;CL:0000785!6.62e-14!2;CL:0000955!6.62e-14!2;CL:0000818!6.62e-14!2;CL:0000954!6.62e-14!2;CL:0000816!6.62e-14!2;CL:0002032!4.29e-13!165;CL:0000837!4.29e-13!165;CL:0000817!1.44e-09!3;CL:0000946!6.10e-08!1;CL:0000786!6.10e-08!1;CL:0000980!6.10e-08!1;CL:0000819!1.18e-07!1 | |ontology_enrichment_celltype=CL:0000945!2.14e-57!24;CL:0000826!2.14e-57!24;CL:0000838!1.65e-28!52;CL:0000542!6.56e-28!53;CL:0000051!6.56e-28!53;CL:0000784!2.37e-21!3;CL:0000738!4.97e-20!140;CL:0002087!1.30e-17!119;CL:0000037!3.84e-17!172;CL:0000566!3.84e-17!172;CL:0000236!1.25e-16!14;CL:0000988!5.99e-16!182;CL:0002031!6.46e-15!124;CL:0000785!6.62e-14!2;CL:0000955!6.62e-14!2;CL:0000818!6.62e-14!2;CL:0000954!6.62e-14!2;CL:0000816!6.62e-14!2;CL:0002032!4.29e-13!165;CL:0000837!4.29e-13!165;CL:0000817!1.44e-09!3;CL:0000946!6.10e-08!1;CL:0000786!6.10e-08!1;CL:0000980!6.10e-08!1;CL:0000819!1.18e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.27e-147;3!CL:0000451;4.07e-41;10!CL:0000840;1.32e-09;5!CL:0000990;7.91e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.27e-147,3;CL:0000451,4.07e-41,10;CL:0000840,1.32e-09,5;CL:0001029,1.32e-09,5;CL:0000990,7.91e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.73e-22!10;DOID:630!6.97e-08!1;DOID:0050177!6.97e-08!1;DOID:0050427!6.97e-08!1;DOID:0060073!1.18e-07!1;DOID:8675!1.18e-07!1;DOID:2355!1.87e-07!1;DOID:2531!5.87e-07!51;DOID:0060083!5.87e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.61e-19!3;UBERON:0004854!1.61e-19!3;UBERON:0009034!1.61e-19!3;UBERON:0002095!1.61e-19!3;UBERON:0004782!1.61e-19!3;UBERON:0003281!1.61e-19!3;UBERON:0009664!1.61e-19!3;UBERON:0002296!1.61e-19!3;UBERON:0005602!1.61e-19!3;UBERON:0001179!1.61e-19!3;UBERON:0006293!1.61e-19!3;UBERON:0004177!1.13e-08!7;UBERON:0000945!1.20e-07!8;UBERON:0010039!1.20e-07!8;UBERON:0002038!1.35e-07!1;UBERON:0009661!1.35e-07!1;UBERON:0002372!1.44e-07!1;UBERON:0001961!1.44e-07!1;UBERON:0001744!1.44e-07!1;UBERON:0001735!1.44e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p10@IRF8 | |short_description=p10@IRF8 | ||
}} | }} |
Latest revision as of 06:14, 18 September 2015
Short description: | p10@IRF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_IRF8_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 170bp_to_uc002fji.2_5end |
EntrezGene: | IRF8 |
HGNC: | 5358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.27e-147 | 3 |
dendritic cell | 4.07e-41 | 10 |
immature conventional dendritic cell | 1.32e-09 | 5 |
common dendritic progenitor | 1.32e-09 | 5 |
conventional dendritic cell | 7.91e-07 | 8 |