FFCP PHASE1:Hg19::chr16:85936515..85936521,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3394 | |EntrezGene=3394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5358 | |HGNC=5358 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=197bp_to_uc002fji.2_5end | |association_with_transcript=197bp_to_uc002fji.2_5end | ||
|cluster_id=chr16:85936515..85936521,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_8_at_IRF8_5end | |description=CAGE_peak_8_at_IRF8_5end | ||
|id=chr16:85936515..85936521,+ | |id=chr16:85936515..85936521,+ | ||
|ontology_enrichment_celltype=CL:0000945!1.82e-64!24;CL:0000826!1.82e-64!24;CL:0000542!2.93e-40!53;CL:0000051!2.93e-40!53;CL:0000838!1.76e-36!52;CL:0000784!2.49e-23!3;CL:0000738!1.05e-20!140;CL:0002087!3.90e-20!119;CL:0000236!4.59e-18!14;CL:0000037!4.02e-16!172;CL:0000566!4.02e-16!172;CL:0000785!3.46e-15!2;CL:0000955!3.46e-15!2;CL:0000818!3.46e-15!2;CL:0000954!3.46e-15!2;CL:0000816!3.46e-15!2;CL:0002031!3.67e-15!124;CL:0000988!5.13e-15!182;CL:0002032!5.47e-12!165;CL:0000837!5.47e-12!165;CL:0000817!1.97e-10!3;CL:0000946!1.48e-08!1;CL:0000786!1.48e-08!1;CL:0000980!1.48e-08!1;CL:0000819!2.46e-08!1 | |ontology_enrichment_celltype=CL:0000945!1.82e-64!24;CL:0000826!1.82e-64!24;CL:0000542!2.93e-40!53;CL:0000051!2.93e-40!53;CL:0000838!1.76e-36!52;CL:0000784!2.49e-23!3;CL:0000738!1.05e-20!140;CL:0002087!3.90e-20!119;CL:0000236!4.59e-18!14;CL:0000037!4.02e-16!172;CL:0000566!4.02e-16!172;CL:0000785!3.46e-15!2;CL:0000955!3.46e-15!2;CL:0000818!3.46e-15!2;CL:0000954!3.46e-15!2;CL:0000816!3.46e-15!2;CL:0002031!3.67e-15!124;CL:0000988!5.13e-15!182;CL:0002032!5.47e-12!165;CL:0000837!5.47e-12!165;CL:0000817!1.97e-10!3;CL:0000946!1.48e-08!1;CL:0000786!1.48e-08!1;CL:0000980!1.48e-08!1;CL:0000819!2.46e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000784;6.36e-118;3!CL:0000451;5.06e-33;10!CL:0000840;5.92e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.48e-118,3;CL:0000451,4.29e-33,10;CL:0000840,5.54e-08,5;CL:0001029,5.54e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.38e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!4.31e-25!10;DOID:2531!7.98e-10!51;DOID:0060083!7.98e-10!51;DOID:630!8.15e-09!1;DOID:0050177!8.15e-09!1;DOID:0050427!8.15e-09!1;DOID:12603!1.71e-08!1;DOID:2355!2.13e-08!1;DOID:0060073!2.46e-08!1;DOID:8675!2.46e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!8.90e-22!3;UBERON:0004854!8.90e-22!3;UBERON:0009034!8.90e-22!3;UBERON:0002095!8.90e-22!3;UBERON:0004782!8.90e-22!3;UBERON:0003281!8.90e-22!3;UBERON:0009664!8.90e-22!3;UBERON:0002296!8.90e-22!3;UBERON:0005602!8.90e-22!3;UBERON:0001179!8.90e-22!3;UBERON:0006293!8.90e-22!3;UBERON:0004177!2.74e-16!7;UBERON:0000945!1.65e-08!8;UBERON:0010039!1.65e-08!8;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.40e-14;3!UBERON:0004177;2.74e-09;5!UBERON:0005057;2.74e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.60e-14,3;UBERON:0004854,1.60e-14,3;UBERON:0009034,1.60e-14,3;UBERON:0002095,1.60e-14,3;UBERON:0004782,1.60e-14,3;UBERON:0003281,1.60e-14,3;UBERON:0009664,1.60e-14,3;UBERON:0002296,1.60e-14,3;UBERON:0005602,1.60e-14,3;UBERON:0001179,1.60e-14,3;UBERON:0006293,1.60e-14,3;UBERON:0004177,5.70e-07,7;UBERON:0005057,5.70e-07,7 | |||
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|short_description=p8@IRF8 | |short_description=p8@IRF8 | ||
}} | }} |
Latest revision as of 06:14, 18 September 2015
Short description: | p8@IRF8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_IRF8_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 197bp_to_uc002fji.2_5end |
EntrezGene: | IRF8 |
HGNC: | 5358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.48e-118 | 3 |
dendritic cell | 4.29e-33 | 10 |
immature conventional dendritic cell | 5.54e-08 | 5 |
common dendritic progenitor | 5.54e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.60e-14 | 3 |
gastrointestinal system mesentery | 1.60e-14 | 3 |
stomach region | 1.60e-14 | 3 |
mesentery | 1.60e-14 | 3 |
gastrointestinal system serosa | 1.60e-14 | 3 |
mesentery of stomach | 1.60e-14 | 3 |
gut mesentery | 1.60e-14 | 3 |
dorsal mesentery | 1.60e-14 | 3 |
dorsal mesogastrium | 1.60e-14 | 3 |
peritoneal cavity | 1.60e-14 | 3 |
spleen primordium | 1.60e-14 | 3 |
hemopoietic organ | 5.70e-07 | 7 |
immune organ | 5.70e-07 | 7 |