FFCP PHASE1:Hg19::chr3:42892461..42892503,+: Difference between revisions
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|id=chr3:42892461..42892503,+
|short_description=p6@CCBP2
|description=CAGE_peak_6_at_CCBP2_5end
|association_with_transcript=3bp_to_ENST00000494619_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1238 | |EntrezGene=1238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1565 | |HGNC=1565 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000494619_5end | |||
|cluster_id=chr3:42892461..42892503,+ | |||
|description=CAGE_peak_6_at_CCBP2_5end | |||
|id=chr3:42892461..42892503,+ | |||
|ontology_enrichment_celltype=CL:0002334!2.73e-08!12;CL:0002615!6.50e-08!3;CL:0002580!2.75e-07!3;CL:0002579!2.81e-07!3;CL:0000136!7.51e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002617;9.22e-14;2!CL:0000764;1.05e-13;2!CL:0000558;1.05e-13;2!CL:0000136;3.29e-12;13!CL:0002541;1.08e-09;3!CL:0002615;1.81e-09;3!CL:0002616;5.22e-08;1!CL:0002581;7.26e-08;1!CL:0002032;2.24e-07;1!CL:0000557;2.24e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,8.12e-14,2;CL:0000764,1.19e-13,2;CL:0000765,1.19e-13,2;CL:0000050,1.19e-13,2;CL:0000038,1.19e-13,2;CL:0000558,1.19e-13,2;CL:0000547,1.19e-13,2;CL:0000549,1.19e-13,2;CL:0000550,1.19e-13,2;CL:0000552,1.19e-13,2;CL:0000136,1.59e-10,15;CL:0002541,1.09e-09,3;CL:0002615,2.23e-09,3;CL:0002616,5.22e-08,1;CL:0002581,7.76e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.26e-07;1!UBERON:0009143;2.24e-07;1!UBERON:0010115;2.24e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-60!115;UBERON:0003688!1.61e-13!6;UBERON:0002358!1.61e-13!6;UBERON:0003684!1.61e-13!6;UBERON:0001178!1.61e-13!6;UBERON:0004457!9.76e-11!12;UBERON:0000042!9.76e-11!12;UBERON:0001049!2.07e-09!57;UBERON:0005068!2.07e-09!57;UBERON:0006241!2.07e-09!57;UBERON:0007135!2.07e-09!57;UBERON:0000178!4.25e-09!15;UBERON:0000179!4.25e-09!15;UBERON:0000463!4.25e-09!15;UBERON:0002298!9.49e-09!8;UBERON:0003075!7.82e-08!86;UBERON:0007284!7.82e-08!86;UBERON:0000310!9.01e-08!10;UBERON:0003978!1.33e-07!3;UBERON:0009751!1.33e-07!3;UBERON:0000946!1.33e-07!3;UBERON:0002523!1.33e-07!3;UBERON:0005983!1.33e-07!3;UBERON:0002165!1.33e-07!3;UBERON:0002062!1.33e-07!3;UBERON:0007280!1.33e-07!3;UBERON:0002346!3.07e-07!90;UBERON:0001443!5.50e-07!11;UBERON:0002616!6.37e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.62e-20;15!UBERON:0000179;9.62e-20;15!UBERON:0000463;9.62e-20;15!UBERON:0005406;3.50e-14;2!UBERON:0002390;2.25e-11;32!UBERON:0003688;4.27e-10;6!UBERON:0002358;4.27e-10;6!UBERON:0003684;4.27e-10;6!UBERON:0001178;4.27e-10;6!UBERON:0003124;1.08e-09;3!UBERON:0000920;1.08e-09;3!UBERON:0002134;9.13e-08;1!UBERON:0005208;9.13e-08;1!UBERON:0004145;9.13e-08;1!UBERON:0005946;9.13e-08;1!UBERON:0005965;9.13e-08;1!UBERON:0002078;9.13e-08;1!UBERON:0002363;2.24e-07;1!UBERON:0002193;6.79e-07;42!UBERON:0004457;7.05e-07;9!UBERON:0000042;7.05e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.04e-20,114;UBERON:0000178,8.11e-20,15;UBERON:0000179,8.11e-20,15;UBERON:0000463,8.11e-20,15;UBERON:0005406,3.74e-14,2;UBERON:0003688,4.76e-10,6;UBERON:0002358,4.76e-10,6;UBERON:0003684,4.76e-10,6;UBERON:0001178,4.76e-10,6;UBERON:0000920,1.09e-09,3;UBERON:0003124,7.47e-09,7;UBERON:0002134,8.84e-08,1;UBERON:0005208,8.84e-08,1;UBERON:0005946,8.84e-08,1;UBERON:0005965,8.84e-08,1;UBERON:0002078,8.84e-08,1;UBERON:0002363,2.31e-07,1;UBERON:0007645,2.31e-07,1;UBERON:0007647,2.31e-07,1;UBERON:0010115,2.31e-07,1 | |||
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| ||
|short_description=p6@CCBP2 | |||
}} | }} |
Latest revision as of 06:59, 18 September 2015
Short description: | p6@CCBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CCBP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000494619_5end |
EntrezGene: | CCBP2 |
HGNC: | 1565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 8.12e-14 | 2 |
erythroid lineage cell | 1.19e-13 | 2 |
erythroblast | 1.19e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 1.19e-13 | 2 |
erythroid progenitor cell | 1.19e-13 | 2 |
reticulocyte | 1.19e-13 | 2 |
proerythroblast | 1.19e-13 | 2 |
basophilic erythroblast | 1.19e-13 | 2 |
polychromatophilic erythroblast | 1.19e-13 | 2 |
orthochromatic erythroblast | 1.19e-13 | 2 |
fat cell | 1.59e-10 | 15 |
chorionic membrane mesenchymal stem cell | 1.09e-09 | 3 |
adipocyte of omentum tissue | 2.23e-09 | 3 |
perirenal adipocyte cell | 5.22e-08 | 1 |
perirenal preadipocyte | 7.76e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.04e-20 | 114 |
blood | 8.11e-20 | 15 |
haemolymphatic fluid | 8.11e-20 | 15 |
organism substance | 8.11e-20 | 15 |
perirenal fat | 3.74e-14 | 2 |
omentum | 4.76e-10 | 6 |
peritoneum | 4.76e-10 | 6 |
abdominal cavity | 4.76e-10 | 6 |
visceral peritoneum | 4.76e-10 | 6 |
egg chorion | 1.09e-09 | 3 |
chorion | 7.47e-09 | 7 |
tricuspid valve | 8.84e-08 | 1 |
right atrium valve | 8.84e-08 | 1 |
outflow tract of atrium | 8.84e-08 | 1 |
outflow part of right atrium | 8.84e-08 | 1 |
right cardiac atrium | 8.84e-08 | 1 |
dura mater | 2.31e-07 | 1 |
future meninx | 2.31e-07 | 1 |
ectomeninx | 2.31e-07 | 1 |
future dura mater | 2.31e-07 | 1 |