FFCP PHASE1:Hg19::chr5:59064137..59064148,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=296bp_to_uc003jry.2_5end | |association_with_transcript=296bp_to_uc003jry.2_5end | ||
|cluster_id=chr5:59064137..59064148,- | |||
|coexpression_cluster_id=C195 | |coexpression_cluster_id=C195 | ||
|description=CAGE_peak_58_at_PDE4D_5end | |description=CAGE_peak_58_at_PDE4D_5end | ||
|id=chr5:59064137..59064148,- | |id=chr5:59064137..59064148,- | ||
|ontology_enrichment_celltype=CL:0002076!4.10e-12!43;CL:0002251!2.62e-09!21;CL:0000066!1.19e-08!254;CL:0000223!2.04e-08!59;CL:0002621!2.25e-07!3;CL:0002166!2.29e-07!3;CL:0002368!4.17e-07!13 | |ontology_enrichment_celltype=CL:0002076!4.10e-12!43;CL:0002251!2.62e-09!21;CL:0000066!1.19e-08!254;CL:0000223!2.04e-08!59;CL:0002621!2.25e-07!3;CL:0002166!2.29e-07!3;CL:0002368!4.17e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002166;2.74e-12;3!CL:0000307;2.74e-12;3!CL:0002621;2.74e-12;3!CL:0002368;3.30e-11;13!CL:0002076;1.49e-08;42!CL:0002138;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.31e-12,3;CL:0002621,2.59e-12,3;CL:0000068,2.89e-12,3;CL:0000069,2.89e-12,3;CL:0000307,2.89e-12,3;CL:0000377,2.89e-12,3;CL:0002368,3.38e-11,13;CL:0002076,7.94e-08,42;CL:0005020,9.49e-07,6;CL:0002138,9.49e-07,6;CL:0005022,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.58e-34;1!CL:0000377;2.74e-12;3!CL:0005022;8.72e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.77e-11!169;UBERON:0000925!8.77e-11!169;UBERON:0006595!8.77e-11!169;UBERON:0003729!5.33e-10!5;UBERON:0001004!1.46e-09!72;UBERON:0000161!5.59e-09!35;UBERON:0001007!8.05e-09!155;UBERON:0001555!8.05e-09!155;UBERON:0007026!8.05e-09!155;UBERON:0003343!1.68e-08!4;UBERON:0004785!1.68e-08!4;UBERON:0000166!6.68e-08!21;UBERON:0001949!2.25e-07!3;UBERON:0000344!3.60e-07!12;UBERON:0002465!4.92e-07!10;UBERON:0000974!5.69e-07!10 | |ontology_enrichment_uberon=UBERON:0004119!8.77e-11!169;UBERON:0000925!8.77e-11!169;UBERON:0006595!8.77e-11!169;UBERON:0003729!5.33e-10!5;UBERON:0001004!1.46e-09!72;UBERON:0000161!5.59e-09!35;UBERON:0001007!8.05e-09!155;UBERON:0001555!8.05e-09!155;UBERON:0007026!8.05e-09!155;UBERON:0003343!1.68e-08!4;UBERON:0004785!1.68e-08!4;UBERON:0000166!6.68e-08!21;UBERON:0001949!2.25e-07!3;UBERON:0000344!3.60e-07!12;UBERON:0002465!4.92e-07!10;UBERON:0000974!5.69e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.74e-12;3!UBERON:0001708;1.50e-09;4!UBERON:0008895;1.50e-09;4!UBERON:0011159;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.59e-12,3;UBERON:0001708,1.32e-09,4;UBERON:0008895,1.32e-09,4;UBERON:0011159,6.13e-08,5;UBERON:0010188,8.02e-07,6;UBERON:0002539,8.02e-07,6;UBERON:0008816,8.02e-07,6 | |||
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| ||
|short_description=p58@PDE4D | |short_description=p58@PDE4D | ||
}} | }} |
Latest revision as of 07:53, 18 September 2015
Short description: | p58@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_58_at_PDE4D_5end |
Coexpression cluster: | C195_Small_Gingival_Bronchial_Smooth_mesenchymal_Urothelial_Tracheal |
Association with transcript: | 296bp_to_uc003jry.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.31e-12 | 3 |
gingival epithelial cell | 2.59e-12 | 3 |
duct epithelial cell | 2.89e-12 | 3 |
branched duct epithelial cell | 2.89e-12 | 3 |
tracheal epithelial cell | 2.89e-12 | 3 |
tracheoblast | 2.89e-12 | 3 |
respiratory epithelial cell | 3.38e-11 | 13 |
endo-epithelial cell | 7.94e-08 | 42 |
lymphangioblast | 9.49e-07 | 6 |
endothelial cell of lymphatic vessel | 9.49e-07 | 6 |
vascular lymphangioblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.59e-12 | 3 |
jaw skeleton | 1.32e-09 | 4 |
splanchnocranium | 1.32e-09 | 4 |
primary subdivision of cranial skeletal system | 6.13e-08 | 5 |
protuberance | 8.02e-07 | 6 |
pharyngeal arch | 8.02e-07 | 6 |
embryonic head | 8.02e-07 | 6 |