FFCP PHASE1:Hg19::chr5:59064631..59064643,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:59064631..59064643,- to FFCP PHASE1:Hg19::chr5:59064631..59064643,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-160bp_to_ENST00000507116_5end | |||
|cluster_id=chr5:59064631..59064643,- | |||
|description=CAGE_peak_23_at_PDE4D_5end | |||
|id=chr5:59064631..59064643,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.85e-09;3!CL:0000067;2.85e-09;3!CL:0005012;2.85e-09;3!CL:0002304;2.85e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.29e-09,3;CL:0000067,2.29e-09,3;CL:0005012,2.29e-09,3;CL:0002304,2.29e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.04e-11!106;DOID:0050687!9.44e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:5409;2.28e-07;4!DOID:1325;3.17e-07;7!DOID:3904;3.17e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.93e-08,106;DOID:5409,1.60e-07,4;DOID:1325,2.67e-07,7;DOID:3904,2.67e-07,7;DOID:0050687,9.84e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.24e-07!155;UBERON:0001555!2.24e-07!155;UBERON:0007026!2.24e-07!155;UBERON:0000481!3.20e-07!347;UBERON:0000477!3.21e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;3.33e-10;21!UBERON:0006947;1.06e-09;3!UBERON:0004054;1.06e-09;3!UBERON:0001778;2.85e-09;3!UBERON:0001775;2.85e-09;3!UBERON:0005904;2.28e-07;4!UBERON:0000488;4.73e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004175,2.88e-10,25;UBERON:0001778,2.29e-09,3;UBERON:0001775,2.29e-09,3;UBERON:0006947,2.97e-09,3;UBERON:0004054,2.97e-09,3;UBERON:0005795,6.86e-08,22;UBERON:0000488,4.02e-07,4;UBERON:0005904,4.88e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,2.40285509343189,0.527533956456907,0,0.331397375727916,0,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.697204805222715,0.426507697462265,0,0,0,0,0,0,0,0.436194716338694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,1.63841583378639,0,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,2.84606484554724,0,2.6759125968766,0,0.560508562981536,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0.883817722424512,0.221533894583621,0.812411591295047,0.128091319725675,0.520237390239513,0.164437904603676,0,0.289803085735052,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,1.03988298880475,1.55210578223795,1.84453049955565,0.196468613246569,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,0,0,0,0,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0,0,0,1.25019619597712,0.22452937262617,0.563057402416611,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.756787138224657,1.72852777344,0,0,0,0,0.23486899728753,0,0,0.408308342509787,0.245668634623536,0.619954687054593,0,0,0,0,0.505008341862199,0.500474079487857,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0.828147600278907,0.674338760312407,0.723033089650446,0.330881918197182,1.08939722046203,0,0.539325232640658,0.196221465125346,0.38474715694639,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0,0.514703430895577,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.763976851116555,0,0,0.308482478109971,0.600686115687835,1.42913216315289,0.336393253036082,0,0.1466765716419,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0.142977993658148,1.62786481617433,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,1.54657762555539,0,0,0.749007023947182,0,0.414415513436035,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.686286847621712,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,1.81434175997808,0,0,0,0,0,0,0,0.154209693802656,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.183138929636687,0.742585499285292,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.580066775656914,0.0852266274161009,0.267096106940212,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,1.116475108079,0.632758849437452,0.38126038784765,0,0.42793898803392,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0.573645408816206,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40398589056729,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.146508179271894,0.121360521749513,0,0,0.95497793895076,1.48482340416319,0,0,0.281338832821026,0.445234820091624,0,0.211125408127993,0.398495976502139,0.276283915531148,5.54252045279407,0.409074730008619,0,0,0.0898683511473268,0.895105873378046,0,1.1837208676432,0,0,0,0,0,0,0.0874599999961957,0,0.568967241427498,2.2882828526349,0.472775363535873,0.344743373241465,0,1.21537496453305,1.77148277162768,0.964771509003264,0,0,0,0,2.94133851501273,0.139423744278603,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,6.05888191277855,2.98578579323551,0.619202951523374,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0.91227394607833,0.19566461893209,0,2.36750641709634,0,0.91821828489147,0.063186579628488,0.300646838828985,0.518440956986236,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0.870806981601766,1.24251839046515,1.06750094169172,0,0,0,0,0.794858446811959,0.0633107959558787,0.586654148204409,0.160317640503067,0.426905989478705,0.39961921916426,1.44090417154106,0,1.71594997861965,0.432164393964449,0,1.41416420770077,0.67952103036807,0.941425616810999,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0,0,0,0,0,0.53746777989381,0,0,0.157566364614447,0,0.0674035438541849,1.27955725969173,0,1.59045937961861,0.272406812223151,0,0.137539436597234,0,0,0,0.303747783290123,0,0,1.20645552710496,0.528001682597033,0.717149357331379,0,0.714695326373367,0,0,0,0,0,0,0,0.681552087141687,2.15292973888239,0.439656701034247,1.32506888912221,0.129282956361551,0,2.73738940614927,0,0.320362237703084,1.88645166119599,0,0.992332043623902,0,0.121792598380896,0.638341257770182,0,0,0,0,0.628216385000937,0,0,0,0,0.110929051536852,0,2.62862406378839,0.37494122388632,0.909894705249887,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.155262956876259,0,0.7975251436739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| 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| ||
|short_description=p23@PDE4D | |||
}} | }} |
Latest revision as of 07:57, 18 September 2015
Short description: | p23@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | -160bp_to_ENST00000507116_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.29e-09 | 3 |
ciliated epithelial cell | 2.29e-09 | 3 |
multi-ciliated epithelial cell | 2.29e-09 | 3 |
non-pigmented ciliary epithelial cell | 2.29e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
internal genitalia | 2.88e-10 | 25 |
ciliary epithelium | 2.29e-09 | 3 |
ciliary body | 2.29e-09 | 3 |
male genital duct | 2.97e-09 | 3 |
internal male genitalia | 2.97e-09 | 3 |
embryonic uterus | 6.86e-08 | 22 |
atypical epithelium | 4.02e-07 | 4 |
duct of male reproductive system | 4.88e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.93e-08 | 106 |
lung small cell carcinoma | 1.60e-07 | 4 |
bronchus cancer | 2.67e-07 | 7 |
bronchogenic carcinoma | 2.67e-07 | 7 |
cell type cancer | 9.84e-07 | 143 |