FFCP PHASE1:Hg19::chr13:99910590..99910597,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2841 | |EntrezGene=2841 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4472 | |HGNC=4472 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JUH9 | |UniProt=Q5JUH9 | ||
|association_with_transcript=30bp_to_ENST00000416594_5end | |association_with_transcript=30bp_to_ENST00000416594_5end | ||
|cluster_id=chr13:99910590..99910597,- | |||
|description=CAGE_peak_4_at_GPR18_5end | |description=CAGE_peak_4_at_GPR18_5end | ||
|id=chr13:99910590..99910597,- | |id=chr13:99910590..99910597,- | ||
|ontology_enrichment_celltype=CL:0000542!5.82e-26!53;CL:0000051!5.82e-26!53;CL:0000838!4.04e-24!52;CL:0002087!5.01e-18!119;CL:0000988!1.47e-17!182;CL:0000037!1.78e-16!172;CL:0000566!1.78e-16!172;CL:0000945!1.37e-15!24;CL:0000826!1.37e-15!24;CL:0002032!3.73e-15!165;CL:0000837!3.73e-15!165;CL:0002031!1.99e-14!124;CL:0000738!3.26e-14!140;CL:0000084!1.03e-11!25;CL:0000827!1.03e-11!25;CL:0000791!4.97e-11!18;CL:0000789!4.97e-11!18;CL:0002420!4.97e-11!18;CL:0002419!4.97e-11!18;CL:0000790!4.97e-11!18;CL:0000236!1.02e-08!14;CL:0000625!8.39e-08!11;CL:0000893!2.15e-07!2;CL:0002489!2.15e-07!2;CL:0000809!2.15e-07!2;CL:0000808!2.15e-07!2;CL:0000894!2.15e-07!2;CL:0000806!2.15e-07!2;CL:0000807!2.15e-07!2;CL:0000805!2.15e-07!2;CL:0002425!2.15e-07!2 | |ontology_enrichment_celltype=CL:0000542!5.82e-26!53;CL:0000051!5.82e-26!53;CL:0000838!4.04e-24!52;CL:0002087!5.01e-18!119;CL:0000988!1.47e-17!182;CL:0000037!1.78e-16!172;CL:0000566!1.78e-16!172;CL:0000945!1.37e-15!24;CL:0000826!1.37e-15!24;CL:0002032!3.73e-15!165;CL:0000837!3.73e-15!165;CL:0002031!1.99e-14!124;CL:0000738!3.26e-14!140;CL:0000084!1.03e-11!25;CL:0000827!1.03e-11!25;CL:0000791!4.97e-11!18;CL:0000789!4.97e-11!18;CL:0002420!4.97e-11!18;CL:0002419!4.97e-11!18;CL:0000790!4.97e-11!18;CL:0000236!1.02e-08!14;CL:0000625!8.39e-08!11;CL:0000893!2.15e-07!2;CL:0002489!2.15e-07!2;CL:0000809!2.15e-07!2;CL:0000808!2.15e-07!2;CL:0000894!2.15e-07!2;CL:0000806!2.15e-07!2;CL:0000807!2.15e-07!2;CL:0000805!2.15e-07!2;CL:0002425!2.15e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.09e-33;24!CL:0000236;7.95e-16;13!CL:0000542;3.52e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.69e-33,24;CL:0000826,4.69e-33,24;CL:0000838,2.49e-15,52;CL:0000542,4.83e-15,53;CL:0000051,4.83e-15,53;CL:0000236,8.86e-15,14;CL:0000988,8.62e-10,177;CL:0002087,3.34e-09,115;CL:0002031,8.17e-09,120;CL:0000738,9.30e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000051;3.52e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!9.67e-15!51;DOID:0060083!9.67e-15!51;DOID:0060058!1.45e-11!10 | |ontology_enrichment_disease=DOID:2531!9.67e-15!51;DOID:0060083!9.67e-15!51;DOID:0060058!1.45e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.06e-23;1!DOID:0070004;1.06e-23;1!DOID:2355;1.49e-23;1!DOID:74;1.75e-12;2!DOID:0060058;6.77e-10;10!DOID:1287;7.07e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.07e-23,1;DOID:0070004,1.07e-23,1;DOID:2355,1.67e-23,1;DOID:74,1.85e-12,2;DOID:0060058,6.78e-10,10;DOID:2531,2.36e-07,51;DOID:0060083,2.36e-07,51;DOID:1287,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.97e-15!7;UBERON:0002370!7.05e-13!4;UBERON:0005058!7.05e-13!4;UBERON:0009113!7.05e-13!4;UBERON:0003295!7.05e-13!4;UBERON:0005562!7.05e-13!4;UBERON:0000178!1.70e-10!15;UBERON:0000179!1.70e-10!15;UBERON:0000463!1.70e-10!15;UBERON:0002390!3.66e-10!102;UBERON:0003061!3.66e-10!102;UBERON:0002193!8.55e-10!112;UBERON:0003351!1.29e-08!6;UBERON:0000974!9.23e-08!10;UBERON:0001042!1.16e-07!10;UBERON:0009145!1.16e-07!10;UBERON:0006562!6.12e-07!11 | |ontology_enrichment_uberon=UBERON:0004177!1.97e-15!7;UBERON:0002370!7.05e-13!4;UBERON:0005058!7.05e-13!4;UBERON:0009113!7.05e-13!4;UBERON:0003295!7.05e-13!4;UBERON:0005562!7.05e-13!4;UBERON:0000178!1.70e-10!15;UBERON:0000179!1.70e-10!15;UBERON:0000463!1.70e-10!15;UBERON:0002390!3.66e-10!102;UBERON:0003061!3.66e-10!102;UBERON:0002193!8.55e-10!112;UBERON:0003351!1.29e-08!6;UBERON:0000974!9.23e-08!10;UBERON:0001042!1.16e-07!10;UBERON:0009145!1.16e-07!10;UBERON:0006562!6.12e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.65e-10;10!UBERON:0000178;8.58e-07;15!UBERON:0000179;8.58e-07;15!UBERON:0000463;8.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,1.01e-09,10;UBERON:0000358,1.01e-09,10;UBERON:0000307,1.01e-09,10;UBERON:0000091,1.01e-09,10;UBERON:0000087,1.01e-09,10;UBERON:0007010,1.01e-09,10;UBERON:0007806,1.01e-09,10;UBERON:0008780,1.01e-09,10;UBERON:0005728,1.01e-09,10;UBERON:0000178,8.83e-07,15;UBERON:0000179,8.83e-07,15;UBERON:0000463,8.83e-07,15 | |||
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| ||
|short_description=p4@GPR18 | |short_description=p4@GPR18 | ||
}} | }} |
Latest revision as of 08:19, 18 September 2015
Short description: | p4@GPR18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPR18_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000416594_5end |
EntrezGene: | GPR18 |
HGNC: | 4472 |
UniProt: | Q5JUH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.69e-33 | 24 |
pro-B cell | 4.69e-33 | 24 |
lymphoid lineage restricted progenitor cell | 2.49e-15 | 52 |
lymphocyte | 4.83e-15 | 53 |
common lymphoid progenitor | 4.83e-15 | 53 |
B cell | 8.86e-15 | 14 |
hematopoietic cell | 8.62e-10 | 177 |
nongranular leukocyte | 3.34e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.17e-09 | 120 |
leukocyte | 9.30e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 1.01e-09 | 10 |
blastocyst | 1.01e-09 | 10 |
blastula | 1.01e-09 | 10 |
bilaminar disc | 1.01e-09 | 10 |
inner cell mass | 1.01e-09 | 10 |
cleaving embryo | 1.01e-09 | 10 |
connecting stalk | 1.01e-09 | 10 |
inner cell mass derived epiblast | 1.01e-09 | 10 |
extraembryonic mesoderm | 1.01e-09 | 10 |
blood | 8.83e-07 | 15 |
haemolymphatic fluid | 8.83e-07 | 15 |
organism substance | 8.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.07e-23 | 1 |
myeloma | 1.07e-23 | 1 |
anemia | 1.67e-23 | 1 |
hematopoietic system disease | 1.85e-12 | 2 |
lymphoma | 6.78e-10 | 10 |
hematologic cancer | 2.36e-07 | 51 |
immune system cancer | 2.36e-07 | 51 |
cardiovascular system disease | 7.27e-07 | 4 |