FFCP PHASE1:Hg19::chr1:163291732..163291812,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83540 | |EntrezGene=83540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14621 | |HGNC=14621 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZD4 | |UniProt=Q9BZD4 | ||
|association_with_transcript=0bp_to_ENST00000271452,ENST00000487578,ENST00000490881_5end | |association_with_transcript=0bp_to_ENST00000271452,ENST00000487578,ENST00000490881_5end | ||
|cluster_id=chr1:163291732..163291812,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_NUF2_5end | |description=CAGE_peak_1_at_NUF2_5end | ||
|id=chr1:163291732..163291812,+ | |id=chr1:163291732..163291812,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.12e-13!679;CL:0000004!3.12e-13!679;CL:0000255!3.12e-13!679;CL:0000012!4.98e-13!682;CL:0000066!1.32e-10!254;CL:0002319!3.42e-08!25;CL:0000055!1.41e-07!180;CL:0000133!1.59e-07!59;CL:0000333!4.53e-07!41;CL:0000003!5.38e-07!722;CL:0000095!8.98e-07!17;CL:0000123!8.98e-07!17 | |ontology_enrichment_celltype=CL:0000548!3.12e-13!679;CL:0000004!3.12e-13!679;CL:0000255!3.12e-13!679;CL:0000012!4.98e-13!682;CL:0000066!1.32e-10!254;CL:0002319!3.42e-08!25;CL:0000055!1.41e-07!180;CL:0000133!1.59e-07!59;CL:0000333!4.53e-07!41;CL:0000003!5.38e-07!722;CL:0000095!8.98e-07!17;CL:0000123!8.98e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.34e-08;25!CL:0000095;7.03e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.38e-10,253;CL:0002319,2.27e-08,25;CL:0000133,7.15e-08,59;CL:0000333,2.53e-07,41;CL:0000095,6.50e-07,17;CL:0000123,6.50e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.37e-56!235;DOID:14566!1.41e-55!239;DOID:0050686!3.05e-28!137;DOID:0050687!9.94e-28!143;DOID:305!1.73e-20!106;DOID:2531!3.66e-20!51;DOID:0060083!3.66e-20!51;DOID:1240!7.11e-16!39;DOID:8692!3.77e-12!31;DOID:3095!7.18e-07!22;DOID:2994!7.18e-07!22 | |ontology_enrichment_disease=DOID:162!1.37e-56!235;DOID:14566!1.41e-55!239;DOID:0050686!3.05e-28!137;DOID:0050687!9.94e-28!143;DOID:305!1.73e-20!106;DOID:2531!3.66e-20!51;DOID:0060083!3.66e-20!51;DOID:1240!7.11e-16!39;DOID:8692!3.77e-12!31;DOID:3095!7.18e-07!22;DOID:2994!7.18e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.64e-13;39!DOID:2531;1.14e-12;51!DOID:0060083;1.14e-12;51!DOID:8692;4.33e-12;31!DOID:0050686;1.95e-07;137!DOID:0050687;2.62e-07;143!DOID:162;2.94e-07;235!DOID:14566;3.96e-07;239!DOID:305;6.59e-07;106!DOID:3095;8.70e-07;22!DOID:2994;8.70e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.91e-57,235;DOID:14566,2.95e-56,239;DOID:0050686,9.83e-29,137;DOID:0050687,5.12e-28,143;DOID:305,1.15e-20,106;DOID:2531,1.16e-20,51;DOID:0060083,1.16e-20,51;DOID:1240,2.95e-16,39;DOID:8692,1.97e-12,31;DOID:3095,8.58e-07,22;DOID:2994,8.58e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@NUF2 | |short_description=p1@NUF2 | ||
}} | }} |
Latest revision as of 08:20, 18 September 2015
Short description: | p1@NUF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUF2_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000271452, ENST00000487578, ENST00000490881_5end |
EntrezGene: | NUF2 |
HGNC: | 14621 |
UniProt: | Q9BZD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.38e-10 | 253 |
neural cell | 2.27e-08 | 25 |
neurectodermal cell | 7.15e-08 | 59 |
migratory neural crest cell | 2.53e-07 | 41 |
neuron associated cell | 6.50e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.50e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.91e-57 | 235 |
disease of cellular proliferation | 2.95e-56 | 239 |
organ system cancer | 9.83e-29 | 137 |
cell type cancer | 5.12e-28 | 143 |
carcinoma | 1.15e-20 | 106 |
hematologic cancer | 1.16e-20 | 51 |
immune system cancer | 1.16e-20 | 51 |
leukemia | 2.95e-16 | 39 |
myeloid leukemia | 1.97e-12 | 31 |
germ cell and embryonal cancer | 8.58e-07 | 22 |
germ cell cancer | 8.58e-07 | 22 |