FFCP PHASE1:Hg19::chr13:99910673..99910680,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2841 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4472 | |||
|TSSclassifier=strong | |||
|UniProt=Q14330 | |||
|association_with_transcript=1bp_to_ENST00000397470,ENST00000397473,NM_001098200,NM_005292_5end | |||
|cluster_id=chr13:99910673..99910680,- | |||
|coexpression_cluster_id=C3392 | |||
|description=CAGE_peak_3_at_GPR18_5end | |||
|id=chr13:99910673..99910680,- | |||
|ontology_enrichment_celltype=CL:0000542!1.95e-43!53;CL:0000051!1.95e-43!53;CL:0000838!5.70e-41!52;CL:0002087!4.12e-32!119;CL:0000945!4.59e-32!24;CL:0000826!4.59e-32!24;CL:0000738!5.00e-29!140;CL:0000236!4.30e-27!14;CL:0000988!4.29e-25!182;CL:0000037!2.26e-24!172;CL:0000566!2.26e-24!172;CL:0002031!1.74e-23!124;CL:0002032!1.30e-21!165;CL:0000837!1.30e-21!165;CL:0000080!2.05e-12!6;CL:0000791!4.63e-12!18;CL:0000789!4.63e-12!18;CL:0002420!4.63e-12!18;CL:0002419!4.63e-12!18;CL:0000790!4.63e-12!18;CL:0000842!7.34e-10!3;CL:0000623!2.62e-09!3;CL:0000825!2.62e-09!3;CL:0000624!1.81e-08!6;CL:0000084!3.21e-08!25;CL:0000827!3.21e-08!25;CL:0000224!1.71e-07!4;CL:0000893!6.01e-07!2;CL:0002489!6.01e-07!2;CL:0000809!6.01e-07!2;CL:0000808!6.01e-07!2;CL:0000894!6.01e-07!2;CL:0000806!6.01e-07!2;CL:0000807!6.01e-07!2;CL:0000805!6.01e-07!2;CL:0002425!6.01e-07!2;CL:0000134!7.45e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.10e-67;24!CL:0000236;1.51e-45;13!CL:0000542;2.42e-25;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.58e-68,24;CL:0000826,9.58e-68,24;CL:0000236,2.24e-42,14;CL:0000542,7.16e-37,53;CL:0000051,7.16e-37,53;CL:0000838,5.49e-31,52;CL:0002087,1.89e-16,115;CL:0000738,8.47e-14,136;CL:0002031,6.60e-13,120;CL:0002032,1.57e-11,161;CL:0000837,1.57e-11,161;CL:0000037,5.14e-11,168;CL:0000988,2.07e-10,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.42e-25;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.42e-08!10;DOID:2531!1.52e-07!51;DOID:0060083!1.52e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:12603;4.83e-18;1!DOID:4960;1.12e-17;1!DOID:0070004;1.12e-17;1!DOID:2355;1.12e-17;1!DOID:0060058;1.57e-15;10!DOID:74;1.64e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.44e-18,1;DOID:4960,8.72e-18,1;DOID:0070004,8.72e-18,1;DOID:2355,1.44e-17,1;DOID:0060058,1.74e-15,10;DOID:74,1.86e-09,2;DOID:2531,3.72e-08,51;DOID:0060083,3.72e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.36e-12!15;UBERON:0000179!4.36e-12!15;UBERON:0000463!4.36e-12!15;UBERON:0004177!1.24e-10!7;UBERON:0002193!1.50e-09!112;UBERON:0002390!7.51e-09!102;UBERON:0003061!7.51e-09!102;UBERON:0002370!4.27e-07!4;UBERON:0005058!4.27e-07!4;UBERON:0009113!4.27e-07!4;UBERON:0003295!4.27e-07!4;UBERON:0005562!4.27e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,1.47187681102573,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,2.18455444504853,1.77901850772711,0.426730222566507,4.40435585739614,0,2.64417949113945,1.90810750907073,2.84606484554724,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.383220493601921,0,0,0.637130828648193,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0,0,0,0,0,2.78704762688578,0.28853842595289,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,6.45500771418748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.563903507879121,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21245917149183,0.267964130156178,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.26940821205835,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@GPR18 | |||
}} |
Latest revision as of 08:22, 18 September 2015
Short description: | p3@GPR18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPR18_5end |
Coexpression cluster: | C3392_lymphoma_CD19_Burkitt_acute_appendix_diffuse_b |
Association with transcript: | 1bp_to_ENST00000397470, ENST00000397473, NM_001098200, NM_005292_5end |
EntrezGene: | GPR18 |
HGNC: | 4472 |
UniProt: | Q14330 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.58e-68 | 24 |
pro-B cell | 9.58e-68 | 24 |
B cell | 2.24e-42 | 14 |
lymphocyte | 7.16e-37 | 53 |
common lymphoid progenitor | 7.16e-37 | 53 |
lymphoid lineage restricted progenitor cell | 5.49e-31 | 52 |
nongranular leukocyte | 1.89e-16 | 115 |
leukocyte | 8.47e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 6.60e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.57e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-11 | 161 |
hematopoietic stem cell | 5.14e-11 | 168 |
hematopoietic cell | 2.07e-10 | 177 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.44e-18 | 1 |
bone marrow cancer | 8.72e-18 | 1 |
myeloma | 8.72e-18 | 1 |
anemia | 1.44e-17 | 1 |
lymphoma | 1.74e-15 | 10 |
hematopoietic system disease | 1.86e-09 | 2 |
hematologic cancer | 3.72e-08 | 51 |
immune system cancer | 3.72e-08 | 51 |